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Information for unigene UN22143

FASTA Sequence
Unigene ID: UN22143Length: 1167  SNP
GTGAAACATAAATATAAGTCTTGAAAATTAAAACTGAACACACATCAGAGCAAGTGTATTTGTTCTAAACAAGCACAAAAGAGATT
CCGAAGTCTTACAAACACAGATTAGTAAAAGACTAGATGATAAAGAGTTTTCAAACACACATCAGTTTAAGAAGACTGAAACATTG
GAGGAACTGTGCATAATGTTTTGTTTTGAGCCTCTCAATCTTTGTTCTTCGATTTCTCCACTGCACTTGGAGCTAAACCAATAGAA
TCAGAGCCCTTCATGATCTTCAGTTTCCTACACGTTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCATC
TTTGTCTTCATAAGTAAGCACAAACTCTGATCCGTGAAGAAGATCCTTCAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTC
CATGAAGTCCACATTGACCAAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAAGACAAGTGTTGATAGCATGTGTAGGTTCCC
AAATCAACTTTCCTCAGATAGGGAGCACCATCCATGCTCACCTTCACAAACAGAGCGCCAAGACCAGGTTTCCCATCAACCTCATT
AGTGTTCTTTGAAGTAGAAGAAGCCATTGTGTTCTTCCTGTAGGATCTGATTGGAGGCCAACCAACAACCTGTGCCTTGGCAGCAG
GTGCATTGTTGGAGCCACTCTTAGCAAGATATCCTCTTTTGTTGCCAGAAGCATGGGATCTTTGCAAGGGAGCAGCGGGAAGAGAA
GTTTCTCATCAGGAGTTCTTGGACTCAGCAAACCGAAATCAGTTTCTCTCTGAGGAGATTGAGAGTCAGGAAGACCTAGCCTTAGC
TCTGTAGCTTTGAAGTTGAGGCTGCTGCTCTTCTTGTCAGCATTGGGAAGGGTTGAGCTGTCAACAGAGGAGCAATCAGACAAACC
AAAGTAGTTGCGTTCCTTCAGACCAGGTGATGTACCCAAACCCTCCTTGTCCACACTTTCCAATCGATAAGACATGAGATCTCTTA
GTTTTCACACTTTTATCTGGAGAGAGAAGACGAACACAGTAGAAGATCAAACTAACGAAGAGAGAGAAAGTGCACGAACGAAATCA
GGAGAGAGAAGGGAAGCAGGGGTCAAGGTCCATCCATGGAAAATGATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179852 auxin-responsive protein IAA8 [Arabidopsis thaliana]8203e-085
NP_001189579 auxin-responsive protein IAA8 [Arabidopsis thaliana]8203e-085
XP_002878628 indoleacetic acid-induced protein 8 [Arabidopsis lyrata subsp. lyrata]8095e-084
BAJ33826 unnamed protein product [Thellungiella halophila]7971e-082
NP_850028 auxin-responsive protein IAA8 [Arabidopsis thaliana]7962e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q38826 Auxin-responsive protein IAA88201e-086
Q38827 Auxin-responsive protein IAA96353e-065
Q5Z749 Auxin-responsive protein IAA215502e-055
P0C132 Auxin-responsive protein IAA305403e-054
A2WTQ5 Auxin-responsive protein IAA55233e-052

TrEMBL top hits (Blast detail)Scoree value
Q3EBW5 Putative uncharacterized protein At2g22670.27961e-082
A9YWR0 GH1 protein6964e-071
A9PFN4 Predicted protein6858e-070
Q8RVH8 Aux/IAA protein6858e-070
B7FIH2 Putative uncharacterized protein6831e-069

Arabidopsis top hits (Blast detail)Scoree value
AT2G22670.1 IAA8; transcription factor8201e-087
AT2G22670.3 IAA8; transcription factor8201e-087
AT2G22670.2 IAA8; transcription factor7966e-085
AT5G65670.2 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor6489e-068
AT5G65670.1 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor6353e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  45%
 
63  27%
 
103  27%

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