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Information for unigene UN22160

FASTA Sequence
Unigene ID: UN22160Length: 1250 SSRSNP
CCGTTCTCTGTTTTCTTTCCTTTTTAGATTGGCTTGTCTTTGTCGAAAACAAGATCCAAATTCCACACACACAACAATAACAACAA
TACCAACAAAGTCCACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAACAAAATGCATTCCGCTAGTAAAC
AAACCACGCCACGAACATTTTATTCATTTTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAACCCAAACGG
CTGGCCAATACACAGACCCGATCCATAACTTCCCATCTTCCCTCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTA
TCCTCAAGCATCTCAATAATCTCTCCGGTCTCTCCAGAGAGTTTCAAGATTATTCCATGAGGCTTCCCTCCGTTCATGAGATGAAC
CACTGTCTCCAACTTCAATGTATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAGAAACAACCGAGTGAACAAATTGTTCTTGC
AGTGCAACGCGACCCAAAAATCGCCCGTAGGGGTACGTCGGATATTGTCCATTATAACTTTGGCCTCTTTCTTCTTCATATCGTAT
CTAATTACTCTTCCCACTTTGTCCCCGGATATAGACACGTAAAATACTTCTCCGAAATGGTATTTGTCGCTGCTATCATTGAAATA
GAAGACGTCTTCTTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGGCTTCATCAACGACTAACTCGGCCA
AGCCTCCTTCTGGTCCGACCTTCATGACCCCAAAGTAACCATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAAGCTAAGTCCT
AAGGGTCTTCCACAACTTGGTACTACTTGATTCCTCGAACAGTTATCTCTGTGAGGAGAAGTGTAGGCGAAGTCGACCCAGCCAAG
TTCTTCTCCGCGCCATTTGAGGATGCGACCGTCGGTGACACCGACATAAGGGCCTTCACCTTGTGAATCAAACTCTAAGCTCTCTG
GTCCAACGCCGGGGAGAGGAATGGTCTTAGCCACTCGAAGAACGTGTTTCGTACCCTTTAAACGGTCCGGTTCGATGATAGTTGAC
CAGAATAAATAGCAAACGACGGCTAAGATAACCGGAGCGGCGGCGACCGGCGTCAGAACTCTCCGGCTGATTGGCATTATTTTTCC
TCTCTCTCTCTCTGGCTAATACGTGAAAGGGAAAATGTGTGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191260 strictosidine synthase family protein [Arabidopsis thaliana]10149e-108
XP_002878125 strictosidine synthase family protein [Arabidopsis lyrata subsp. lyrata]10149e-108
AAK43996 unknown protein [Arabidopsis thaliana]10103e-107
CAB69786 hypothetical protein [Arabidopsis thaliana]8921e-093
BAJ33861 unnamed protein product [Thellungiella halophila]8472e-088

Swiss-Prot top hits (Blast detail)Scoree value
P92976 Strictosidine synthase 32842e-024
P94111 Strictosidine synthase 12742e-023
P68174 Strictosidine synthase (Fragment)2662e-022
P68175 Strictosidine synthase2662e-022
P18417 Strictosidine synthase2402e-019

TrEMBL top hits (Blast detail)Scoree value
Q9M1J7 Putative uncharacterized protein At3g5701010146e-108
Q94K89 Putative uncharacterized protein At3g5701010102e-107
Q9M456 Putative uncharacterized protein (Fragment)8929e-094
Q9M1J6 AT3g57020/F24I3_1008311e-086
Q9ZVB7 Putative strictosidine synthase6454e-065

Arabidopsis top hits (Blast detail)Scoree value
AT3G57010.1 strictosidine synthase family protein10143e-110
AT3G57020.1 strictosidine synthase family protein8316e-089
AT2G41300.1 strictosidine synthase6578e-069
AT3G57030.1 strictosidine synthase family protein5082e-051
AT3G57020.2 strictosidine synthase family protein4695e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  27%
 
112  18%
 
123  27%
 
83  27%

Unigene MembersMember information