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Information for unigene UN22164

FASTA Sequence
Unigene ID: UN22164Length: 1243  SNP
GGGTCACTAATAAATCAAAAGAAATTTATAAAAAAAAGCAAACTCTCTCAACCACTCGAGAAGAAAACGTTAACAGTTATCTCTCT
GACTGTGCGTGTTGATCTTCTATTGTGTTCTCTCGACTTCCCAGAGAAGGAAAAGATGTGGTTTTTCGGATCGAAAGGAGCATCTG
GATTCTCGGCTCGTTCCACAGCAGAAGAAGTCACACATGGTGTCGACGGAACTGGCCTCACTGCCATTGTCACAGGAGCATCGAGT
GGTATAGGAGTGGAGACAGCGCGTGTTCTTGCACTGCGTGGTGTGCACGTTGTTATGGCGGTGAGGAACACTGGCTCTGGTGCTAA
AGTCAAAGAAGATATCGTCAACCGTGTCCCTGGAGCTAAACTAGATGTCATGGAGTTAGATCTCAGCTCTATGGACTCTGTCAGGA
AGTTTGCTTCTGATTACAAATCATCTGGTCGTCCTCTCAACCTCTTGATCAACAACGCTGGGATAATGGCATGTCCCTTTATGCTC
TCTAAGGACAACATCGAGCTGCAATTCGCGACCAACCATTTAGGTCATTTTCTGTTGACAAAGCTTCTGCTTGATACAATGAAGAA
CACATCACGCGAGAGCAAGAGGGAAGGCAGGATTGTTAATTTATCATCAGAAGCTCATCGGTTCTCGTATCCAGAAGGAGTCCGCT
TTGACAAGATTAACGACCAGTCAAGTTACAGTAGTATGCGAGCTTATGGACAATCTAAACTCTGCAATGTATTGCACGCCAACGAG
CTTGCAAAGCAATTGAAGGAAGATGGAGTCAATATAACAGCAAACTCACTTCATCCAGGAGCCATTATGACAAATCTTGGGCGCTA
CTTCAACAGCTATTTGGCTGGAGCTGTTGGTGCAGTGGCTAAATATGTGCTCAAGACTGTTCCGCAGGGGGCGGCGACGGCTTGCT
ACGTGGCATTGAATCCTCAGGTTACAGGAGTTACAGGGGAATACTTCTTGGATAGCAACATTGCTAAACCATTATCACTTGCCAAA
GATTCAGAGTTGGCCAAGAAGGTTTGGGAGTTCAGCACTAAGCTTACCGAGTCACAATCAGGAGAAAGTAGTTCTTGAAACTAGAA
TGTTCAGTGAATCTTTTACGTTGTGATTTCTATTCGAGTCTTTACCAAAGTAAATAAAATGTAATAACAAATCTGAATCATTGCAA
TTCTGCAAATTGTTGGTTTAGTTCTGGTTCTAACCGGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACC91270 short-chain dehydrogenase/reductase family protein [Capsella rubella]15382e-168
XP_002869780 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]15301e-167
NP_849428 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]15131e-165
BAE99458 hypothetical protein [Arabidopsis thaliana]15094e-165
NP_194073 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]14825e-162

Swiss-Prot top hits (Blast detail)Scoree value
Q91WL8 WW domain-containing oxidoreductase5063e-050
Q9NZC7 WW domain-containing oxidoreductase4884e-048
Q5R9W5 WW domain-containing oxidoreductase4858e-048
Q5F389 WW domain-containing oxidoreductase4812e-047
Q803A8 WW domain-containing oxidoreductase4812e-047

TrEMBL top hits (Blast detail)Scoree value
B2WS98 Short-chain dehydrogenase/reductase family protein15381e-168
Q3E9X4 At4g2343015138e-166
Q0WTU0 Putative uncharacterized protein At4g2343015092e-165
Q8H1Q6 Putative uncharacterized protein At4g2342014823e-162
Q8L9T6 Putativepod-specific dehydrogenase SAC2514814e-162

Arabidopsis top hits (Blast detail)Scoree value
AT4G23430.2 short-chain dehydrogenase/reductase (SDR) family protein15144e-168
AT4G23430.1 short-chain dehydrogenase/reductase (SDR) family protein14902e-165
AT4G23420.1 short-chain dehydrogenase/reductase (SDR) family protein14822e-164
AT4G23420.2 short-chain dehydrogenase/reductase (SDR) family protein14822e-164
AT4G11410.1 short-chain dehydrogenase/reductase (SDR) family protein11443e-125

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  25%
 
101  8%
 
62  17%
 
124  33%
 
92  17%

Unigene MembersMember information