 |
Information for unigene UN22177
| FASTA Sequence |
| Unigene ID: UN22177 | Length: 1117 |
SSR | SNP | GAATTGTGCTGCTATTTATATGATTAATGAAAAAAAATTAATAAGCAAAAACAGATGTACAAATGCAGACGAAGAAACAAAAATGA
AAAGGAGGCAAATGTGTGTATTAAGCTGCAGTGACAATGGTTTGAAGCAGAGTTTCCAGCTCTTTCAAGCTCACATTACTGAGATC
AGGGTATACAGCAATCGCCTCTTTGAAGTCCTGATCAGAGGTTGAAGAAGTGTATGTGATCACACATGACATGCCTGCTTTTGTAG
CAGCCTGCAGGCCAATCACACTGTCCTCTATGACCAAACAGTCTTTCACTGAAACACCTAGCTTCTCGGCAGCTGTTATATATATA
GAAGGATCAGGTTTCTTCTCCTTAACATCATCTCCTGCAAGAAAGCAATCAAGTCCTTGGAATCGCTCGATTTGGATTAGATTCTC
AAGACATAAGACAACTGAACTCTTTGTAGCTGCAGAACACACAGATAGTTTCTTCCCAGCAGCTCTTGCTTCATCCATTAGTCTTA
TTACACCAGGTCTTGCTTCTACACCTCCTGATTTAATGATCTCTTTGTACCTCTCTGTCTTCCAATCCTGAAGAGTATCGATCAAC
TTGGCTCGATCATCGTCACTCTCTGGAGGTGTGTCGAAAAGGGTCGAAGTTGGCCATCCATTCTCTCTAAAGTACCATCTCATTTT
AGGTTTCCCACCTCCGACAAGATTCTGAAACTTGTCGTAGAACTCGAGGCTCCAGTTGAGAGACTCGGATGAGGAAGGAGGACATC
GAACATCGAAATGCGAGAATGCGTCGTTGTAAGCTTGACGGTGTAAGTTCTCCGATTCGAGTATCACACCGTCGCAGTCGAAGATC
AGAGCTTCGAGAGACCGTGAAGCTGATGATGCCGAGACTGAAGAAGCACGAGATTTTGGATAAACGTTTCTTGATTTGAAACGCAG
CGTTTGGAGACAAGGGAAGCGGTTGAAGCCAATGGAGGAGGTACCCGCGGTGGATCGGGGGAAGAGAATCGATGAGTAGCTGCAAG
AAACCGCCATTGATGAATCTCTAACCCTCTATGTGTGTGTGTGGATCCGAGCTGCTCTGACTTAGTGAGATAAAATATATAAAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868937 hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata] | 1397 | 3e-152 |
| NP_568077 haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] | 1388 | 3e-151 |
| AAM83233 AT4g39970/T5J17_140 [Arabidopsis thaliana] | 1384 | 1e-150 |
| AAM65187 unknown [Arabidopsis thaliana] | 1379 | 4e-150 |
| ACU20064 unknown [Glycine max] | 1141 | 1e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O33513 Protein cbbY | 240 | 2e-019 |
| P40119 Protein cbbY, chromosomal | 224 | 1e-017 |
| Q04541 Protein cbbY, plasmid | 216 | 1e-016 |
| P54607 Uncharacterized protein yhcW | 190 | 1e-013 |
| P95649 Protein cbbY | 187 | 3e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q680K2 MRNA, complete cds, clone: RAFL22-43-L07 | 1388 | 2e-151 |
| Q8L7U1 AT4g39970/T5J17_140 | 1384 | 7e-151 |
| Q8LAS1 Putative uncharacterized protein | 1379 | 2e-150 |
| C6TE12 Putative uncharacterized protein | 1141 | 1e-122 |
| B9T3Q7 2-deoxyglucose-6-phosphate phosphatase, putative | 1125 | 7e-121 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39970.1 haloacid dehalogenase-like hydrolase family protein | 1389 | 1e-153 |
| AT3G48420.1 haloacid dehalogenase-like hydrolase family protein | 430 | 2e-042 |
| AT1G56500.1 haloacid dehalogenase-like hydrolase family protein | 168 | 4e-012 |
| AT4G21470.1 ATFMN/FHY (riboflavin kinase/FMN hydrolase); FMN adenylyltransferase/ riboflavin kinase | 127 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
