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Information for unigene UN22178
| FASTA Sequence |
| Unigene ID: UN22178 | Length: 1202 |
SSR | SNP | GGAGACAACCAGCCCCTTTCTTTTCTCCACGATCAACGACGAAGGTCGAATACGATCGCCATTTTCCAGTCTCTCTCTCTCTCTGT
GTCTTCGTTCAATCTTATCTCAGTGATTTACTTGCAAGAGAAGTATCCTCTTAAGCTCTCTCTAGAGTCTCAGTTTTCTTTTTCCA
CCATGGCCGGCCAAAACGCGCGTTTGAATGTGGTCCCCACTGTCACAATGCTCGGTGTGATGAAAGCTCGTCTCGTTGGAGCCACA
AGAGGCCACGCTCTCCTCAAGAAGAAGAGCGACGCTCTAACCGTTCAGTTCAGAGCCCTTCTCAAGAAAATCGTGACGGCCAAGGA
ATCAATGGGAGATATGATGAAGACATCCTCTTTCGCTCTCACCGAAGTCAAGTACGTCGCCGGCGAGAACGTCAAACACGTCGTCC
TCGAGAACGTCAAAGAAGCCACGCTCAAAGTCAGGTCCAGGCAAGAGAACATCGCCGGGGTGAAGCTCCCCAAGTTCGATCATTTC
TCCGAAGGAGAGACCAAGAACGACTTGACCGGTTTAGCTAGAGGTGGACAGCAGGTCCAAGCTTGCCGTGTGGCTTACGTGAAAGC
CATTGAGGTTCTAGTCGAGCTTGCTTCTCTCCAGACTTCGTTCTTGACGCTTGATGAAGCGATCAAGACGACTAATCGGAGGGTGA
ACGCTCTGGAGAACGTGGTGAAACCGAAGATTGAGAATACGATTAGTTACATCAAGGGAGAGCTTGATGAGCTCGAGAGGGAAGAT
TTCTTCAGGCTGAAGAAGATTCAGGGGTACAAGAGGAGGGAAGTCGAGAGACAAGCTGCTAATGCTAAGGCCTTTGCTGAGGAAAT
GGTTCTTGAAGGGATCTCTATGCAGAGAGGGATTTCGATAAACGCTGCTCGTGATTTACTTGCTGGTGGTGCAGAGAAGGATGCAG
ACATTATTTTTTGAGGTGTGCGTGTGTGTGTCTGAGAGGCTCTCTATTTATATTTTTGTTTGTGATTGTTTGGTTTATTAATCGGT
TCATCGGAGTTTATGTTTCTTCAAATAAAATGGATTTGATGTAGATGAAAGATTGTTGTATCATCTTGAGTTGTGATTTGCTATGA
TTTTCCTGAAGAGGTTTGTGATTGTTACTCTTGTGTAATGATTAATTACCTTGTTTCAAATAAGTATGGATGTTACATGTTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878236 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1239 | 7e-134 |
| NP_191432 V-type proton ATPase subunit D [Arabidopsis thaliana] | 1233 | 3e-133 |
| CAB46439 v-ATPase subunit D [Arabidopsis thaliana] | 1229 | 1e-132 |
| XP_002523036 ATP synthase subunit d, putative [Ricinus communis] | 1085 | 5e-116 |
| XP_002282632 PREDICTED: hypothetical protein [Vitis vinifera] | 1073 | 1e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XGM1 V-type proton ATPase subunit D | 1233 | 1e-134 |
| Q86A77 V-type proton ATPase subunit D | 608 | 4e-062 |
| P87220 V-type proton ATPase subunit D | 607 | 6e-062 |
| O59941 V-type proton ATPase subunit D | 591 | 4e-060 |
| Q61IU3 V-type proton ATPase subunit D | 578 | 1e-058 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWD3 Vacuolar-type H+-ATPase (V-ATPase) subunit D | 1233 | 2e-133 |
| B9SAL7 ATP synthase subunit d, putative | 1085 | 3e-116 |
| B9T370 ATP synthase subunit d, putative | 1072 | 1e-114 |
| B9GJS3 Predicted protein | 1057 | 6e-113 |
| D6PQJ5 AT3G58730-like protein (Fragment) | 880 | 2e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58730.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | 1234 | 1e-135 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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