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Information for unigene UN22192
| FASTA Sequence |
| Unigene ID: UN22192 | Length: 1292 |
| SNP | GGAGGCAAAGGAGAAAGAAGATGAAGAGGAAAGGTTAGGTAGAAAACGAGAAGCACGCAACGCACGCAAGGAGGGTCTGACATAAT
AAAAATATGCTCTCACTCACTTAGGCTAAGAATCTATCTGTGGATTAGGGTTTCCATCGATTTCAATCTCTTCCTTGGGCTTCAGA
GATTCTCATCGTCTCCGTCTTTATATATAACACACAATACACATTCTTCGTCTTTGTGTGGTTGTTTCTTATCTTGTGAGGAGCTG
CGATAAGAAGGTCTTTCCGGTTCAGATAAAAATCGATGGATTCGCAGATGCTCGTGGCGCTTGGTCTATCCCTTGTGGGTGGATTA
AGTACTTCTTTAGGTGCGCTTTTCGTAGTTCTTAGCGAGACTCCCAATATGAAGATGCTTGGACTTCTTCAGGGTTTTGCGGCAGG
TCTGATGTTGAGCATATCCTTCCTGGATTTGGCTCATAATGCTATCAACTCTATTGGCTTCTTGAAAGGCAATCTCTGGTTTTTCG
GTGGTGTGATATTCTTTGCGTGTATTGCCAAATTCATACCCGAACCAACACTTGCTCCTTCTACTGACGTGAAAAGAAGAAAGAAA
AATGGAGACGAGGGAGGTAAGGACATGGCGAAGAAGCATCGCCGCCAAGTCTTATACAGTGGAATTGTTACAGCTATTGGAATAAG
CTTGCACAATTTTCCAGAAGGGATGGCTGTATTTCTCGGATCAATTAAGGGCATGCGAGTTGGTGTTAATCTGGCTTTGGCAATCG
CTTTACATAACATTCCCGAGGGTGTTGCGGTTGCACTTCCTATATATTTTGCAACAGAGAGCAAATGGCAGGCATTCAAATTGGCA
ACACTCTCTGGATTAGCTGAGCCTCTAGGTGTTATTATCGTGGCTTATCTATTCCCTAGCAGCTTGAGTCCAGAAATCCTTGAAGG
ATTGTTGGGAGCAGTTGGTGGAATCATGGCATTCCTAACTTTGCACGAAATGCTCCCTTTGGCATTTGATTATGCTGGACAGAAAC
AAGCTGTAAAGGCTGTGTTTGTCGGTATGGCTTGTATGTCTGCAAGTCTTTACTTTCTGGAGCTGAGTTTGCCTGACTCAATGAGC
TAGTAAGTTTAAGTAATGCTATGTGTGCAATAATTCCTCCTGAAAGACATGAATCAGTCTCTGGAGTATAGTCTCTTTGTATCTGT
GAAATCAATAGGATCTGTAAACAATTGTTTTTAATTCAAAGGAATAATCTCTTTTTAACCTCTTATTTAAGAATAATCTTTACCAA
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885408 metal transporter family protein [Arabidopsis lyrata subsp. lyrata] | 1339 | 2e-145 |
| NP_566669 ZIP metal ion transporter [Arabidopsis thaliana] | 1320 | 3e-143 |
| XP_002513470 integral membrane protein, putative [Ricinus communis] | 1248 | 7e-135 |
| XP_002299235 ZIP transporter [Populus trichocarpa] | 1235 | 2e-133 |
| XP_002303891 ZIP transporter [Populus trichocarpa] | 1222 | 7e-132 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B1HYT6 Zinc transporter zupT | 453 | 5e-044 |
| Q3AU90 Zinc transporter zupT | 452 | 6e-044 |
| Q8ENQ1 Zinc transporter zupT | 429 | 3e-041 |
| Q3B4G1 Zinc transporter zupT | 422 | 2e-040 |
| A4SE48 Zinc transporter zupT | 421 | 2e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q940Q3 AT3g20870/MOE17_16 | 1320 | 2e-143 |
| B9RIA1 Integral membrane protein, putative | 1248 | 5e-135 |
| B9GM76 ZIP transporter | 1235 | 2e-133 |
| B9GWA0 ZIP transporter | 1222 | 5e-132 |
| Q6H7N1 Os02g0196000 protein | 1179 | 5e-127 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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