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Information for unigene UN22208
| FASTA Sequence |
| Unigene ID: UN22208 | Length: 1160 |
SSR | SNP | ACTTTTACAATTAATCGAATAATCTTATAATTAAAGTCTAGCCATTTTTTGAATATTAAAAAAAACCTTACATGTTTTATTTTCTT
TATTGCTTCCAATTGAAATCTTTCACAGCTTAGTAAGGATCATATCTAAGCTTCCAAATAAATAAAGAACTTTTGAGTTTTACAAC
TTTCTCCATCATTATTGTATCATCAACCACTTTATTTCTTCTTTAGATTTTGTTGCCTTGTTCCATAGAACTTGTGAAACTTGAAC
TCCCTTTTGTGTTTTGAGTGAAAAAGCTTAAAAGCTTTTTGCTGCCAATCTCCACTTTTTTTTTCTGGCTTTCACTGATTTGGTTT
ATTTAATTATTGCACTCTGTTATTCATCACCAGACCGTAATGAAGAACCAAAAGGATGAGATCACAAACGCAAACGCCAAGTTATG
AGTATTAATCGCTGAAACTCCACTTGTTGTTGAGTTGGCTTTTGCAGTAGCAGCAGCAACAACAGGCTTAGTAGTAGAGGACGGTG
GGGATGGTGGCTCGTCATATGTATAATCATCATCACCGGGAGGTTGTGGAGGAAGTGGTGAAGAAGATGAACCATGATCTGAAGGA
CCTTCAGGATTCATGATAGGTATGTAACTGCTAATATGAAGCACGGAGATGTTATACGGATGTGTCGCAACAGAGTCTATAAGCTT
AGCGTCAAGGATAGATCCGGGAACCGCGGATCCGAACATGACGTCGCCGTTGCTCATAACGGTTGCGTTTATGAAACCTTGCTGGC
CTTTGGCTTGACCGCTTGATTGGAAGAGAGTGGTGAGTATTACTGATTTTTTGTTGAGGTTCTTGAGTTTCTTGATGTCGTAGTAA
TCTAGAATGACGTGGAGGCTGAGGATTTTCTTGTTGTCTTCGGTTGATTGGTCGGAGAAAACGGACACTGCGTCGTTGGAGAGGGC
GAGGACGGTTATGGTTTGACGGGAGTTGATGGTGGAAGCGAGTCCGGTTTGGGAGAGGAGGTTGTTGAAAGTGGAGAACTCGTTGT
TCAGGTTTAAGATGCGTGTGATGTTGAATGCGTGTGCATTGAGGAATGTAGAAGCAAAGAAGAAGAAGAGTGTAAGTGAAGCAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGACATTGTGTGGATTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882785 hypothetical protein ARALYDRAFT_478625 [Arabidopsis lyrata subsp. lyrata] | 645 | 5e-065 |
| NP_187872 fasciclin-like arabinogalactan protein 14 [Arabidopsis thaliana] | 631 | 2e-063 |
| ABK28554 unknown [Arabidopsis thaliana] | 631 | 2e-063 |
| XP_002512774 Glycoprotein X precursor, putative [Ricinus communis] | 490 | 5e-047 |
| CAN66163 hypothetical protein VITISV_008126 [Vitis vinifera] | 466 | 3e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LTW9 Fasciclin-like arabinogalactan protein 14 | 631 | 9e-065 |
| Q9ZQ23 Fasciclin-like arabinogalactan protein 3 | 358 | 4e-033 |
| Q9LZX4 Fasciclin-like arabinogalactan protein 10 | 342 | 3e-031 |
| O22126 Fasciclin-like arabinogalactan protein 8 | 323 | 5e-029 |
| Q9SU13 Fasciclin-like arabinogalactan protein 2 | 320 | 1e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MEV6 Putative uncharacterized protein (Fragment) | 631 | 1e-063 |
| B9RGR5 Glycoprotein X, putative | 490 | 3e-047 |
| A5BYV9 Putative uncharacterized protein | 466 | 2e-044 |
| B9GLR8 Fasciclin-like arabinogalactan protein family protein (Fragment) | 461 | 7e-044 |
| A5ATP0 Putative uncharacterized protein | 434 | 1e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR) | 631 | 8e-066 |
| AT2G24450.1 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR) | 358 | 4e-034 |
| AT3G60900.1 FLA10 | 342 | 3e-032 |
| AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8) | 323 | 4e-030 |
| AT4G12730.1 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2) | 320 | 9e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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