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Information for unigene UN22226

FASTA Sequence
Unigene ID: UN22226Length: 1637 SSRSNP
AAAGAATTGTATTGTGTTTGTATATTGTACATTAAAATACTAAGGATAAAAAAAAAGAGATGTGCTTACTGATTAGAATACTGATT
TTAACAAAGATGTGCATACTGATTAAAATCTACGCTTATTATGAAAACTTTGTGCATGAAACAAGAAAGTAAAAATAAATATTGCA
TGAGATTAAGAAGAAACATGTTCAGATGAGACATATATGTTCGAAAACGAGAAAGAGGTGTCGATGAGCAAGAGAGAAACAGAGAA
AGATGGGTCAAAAATCAAAACAAGAAGCTTGCGAAACAAGTAACCTTTTACTTCTTCTCCGGCGGCGAACAACGGTGGTTTTTTTC
TGTTCTTCTTCTTCTTCTTCAAAGCAGGTCGGCGACGTTTGAGGGAAGCTCCTCAACGACCACATTGTAGAATTTCTGAATATCAA
AAAGCATTCTCTCATCGTCACGAGTCACGAAGTTGATCGCCACACCTTTCCTCCCAAACCTTCCACTTCTCCCGATACGGTGAAGG
TAGTTCTCCGGCTGAGTTGGGAGGTCGAAGTTGATGACCAGAGAGACTTGCTGCACATCGATACCACGAGCCAATAGATCGGTCGT
GATGAGAACACGGGAAGAACCAGACCTGAACTCTCTCATGATGATGTCTCTCGTGTTCTGGTCCATGTCTCCGTGAGTCGCTGAGA
CAGTGTGGTCACGGCTCCTCATTTTGTCGGTGAGCCAGTCCACCTTGCGACGAGTGTTGACGAAGATGACACTCTGAGTGATGGCT
AACGTCTCGTAGAGGTCGCAGAGAGTTTCGAGCTTCCACTCTTCTTTCTCCACGTTCACGTAGAACTGCTTGATACCTTCGAGAGT
TAGCTCGTCGCGCTTCACCAGGATTCTCACCGGTTTGCTCATGAACTTCCTTGTGATCTCGAGAGCCTCTGGTGGCATAGTAGCTG
AGAACACTCCGACCTGGATCTTTGGTGGGAGAAGCTGGAATATGTCGTAGATCTGATCCTTGAAACCACGGGAGAGCATTTCGTCA
GCTTCATCGAGGACAAACATCTTGATGCTGTCAGAGCGAAGTGACTGTCTTCGGAGCATGTCAAAGACACGACCTGGAGTTCCAAC
GACAACGTGAACACCGGCCTGGAGAATGCGCTGATCTTCACGAACACTGGTACCACCGACACAGGCGTGGACCTTGACGCCAAGGT
AATCTCCGAGAGCACGCATGACCTTCTCGATCTGCTGAGCAAGCTCTCTGGTGGGAGCCAAGACGAGAGCCTGCTGGATCACATCA
AGTCCCTTGCAAAAGGGAACGATTCCTCTTTGCTGAATAGCAGAAGGCTTTTCAAAACCATAGGCATAGATACCCCTAAGAAGGTT
CTCTTGCAAACCCATGGCATCAAAGCTCTCGTGGACCTCATCATAGGAGGTGAAGAACTCATCCTGTCCCTCAAGGACTTCATTGA
GTCTCTGGTCAAACTGACGAGTATCAAACTGGGTGCCTTCAGGTGCTGATCCTGCCATGACTTGGGAGATTGAGAAACAAAAGTGA
AAGACTTTCTTCTTTCTTCTTAGAGAGAGAGCTTGAAATCGTCCAAGCTCGGATCTGAAGCGAATGGTAAAGAGATAAACTAAAAA
AAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566469 translational initiation factor 4A-1 [Arabidopsis thaliana]15311e-167
CAC43286 translation initiation factor eIF-4A1 [Arabidopsis thaliana]15311e-167
NP_001078148 translational initiation factor 4A-1 [Arabidopsis thaliana]15311e-167
NP_001189885 translational initiation factor 4A-1 [Arabidopsis thaliana]15311e-167
AAL91176 eukaryotic translation initiation factor [Arabidopsis thaliana]15283e-167

Swiss-Prot top hits (Blast detail)Scoree value
P41376 Eukaryotic initiation factor 4A-115316e-169
P41377 Eukaryotic initiation factor 4A-215083e-166
Q40467 Eukaryotic initiation factor 4A-1415056e-166
P41379 Eukaryotic initiation factor 4A-215002e-165
Q40465 Eukaryotic initiation factor 4A-1114984e-165

TrEMBL top hits (Blast detail)Scoree value
A8MRZ7 Uncharacterized protein At3g13920.315311e-167
B9S5V7 Dead box ATP-dependent RNA helicase, putative15085e-165
B9HDC5 Predicted protein15051e-164
D2X5K2 DEAD-box RNA helicase-like protein15051e-164
B9DHY5 AT1G54270 protein (Fragment)15041e-164

Arabidopsis top hits (Blast detail)Scoree value
AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor15324e-170
AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor15324e-170
AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor15092e-167
AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative14752e-163
AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor14213e-157

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  50%
 
73  30%
 
82  20%

Unigene MembersMember information