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Information for unigene UN22233

FASTA Sequence
Unigene ID: UN22233Length: 1001 SSR 
CACCTTAAAGTCCTAAAACACAATTAGATAGAGTTTCAAATCACAGGACGAGATTTCTGAGTATTTTTAAAATTCCAACTCTACTT
GGCTCTTGCCTTCTTATTAGAGAGACTGCTAACAATGAAATCATCATCATCATCAGAATCCTTCTTCCGCTTCTTCGTGGTTGGTT
TCGAATCATTTCCTTTCTTTTTGCCTGACAAAGCTTCAGACGACGGTTTTTTTCCTCCTTCTTCTCGGCCACTACTGATTTGGAGC
CGGGTTCTTGGGGCACTTCTTGGGGTGGAAGGTGCAGATTTTGTAGGAGAGCTGAACTTTCCATTCTTTTGCAACTTCTTCTCAAG
AACTTTCTTTGCCTCTGCAGCTGGAAGCAACCCTGACTCCATCATCCAGATCTTAGCCATTTCGCTAGTTGGAACTTGCTTGTGAA
GTGGCTCGTAGAAAATCCTAAGTGGATCTCTCTCCTCGGGTTGGTCTCTCTTCTGACCAGGCAAATCATAAACTTTCTTCTCCTTC
TTCTTCTTCACATCTCCTTCTTCTTTTTTCTTCTTCTTTGCCTCTTCTTCTTCTTTCTCTTTCTCTTTCTCTTTCTCCATCTTCTT
TTTCTTCAACTCTTTCTCCTTTGAGACGCCGCCAGCAGATGAATTCCTCTTGGAAAGAGGTTTGTCATCGTCCTCTTCTTCGTCAA
TCTCCTTCTTCTTAACTGGCTTTGGGCGAGACCCAGATAACTTGATGGGTTTGTTATCATCATCATCATTGTTGTCCTTGTTCAAT
TTCCTCGAAGCTGACGAACCAGCATTGTTGGCGTTTGTAGACGGCTTCTTCTTAACCAACGAACCCAAGCTCTTGTTGTCTTCGTC
AGCCTCCTCTTTCTTCACATCTTTAGCATCATCCGATGTCATCCTTCCTTCTTCTTCCACCTACCAACAAGCTTCGGGGGAGATTT
CAGACGGAAACCGCTGTCGTGTGTTTCCCCCTTGGGTCAGGTCAGTTATGCCCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890362 hypothetical protein ARALYDRAFT_312926 [Arabidopsis lyrata subsp. lyrata]6071e-060
NP_173428 uncharacterized protein [Arabidopsis thaliana]5952e-059
AAF79914 Contains a weak similarity to Rap8 (Rac-3-1) gene from Rhynchosciara americana gb|U69899 [Arabidopsis thaliana]5952e-059
XP_002510538 conserved hypothetical protein [Ricinus communis]5074e-049
XP_002306929 predicted protein [Populus trichocarpa]4572e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q9VJ87 Pre-mRNA-splicing factor CWC22 homolog1836e-013
Q869E1 DNA ligase 11792e-012
A5E4P1 Protein PXR11792e-012
Q6BUE3 Protein PXR11603e-010
Q55FI4 Nucleolar protein 581594e-010

TrEMBL top hits (Blast detail)Scoree value
Q9LNS7 T20H2.23 protein5952e-059
B9R895 Putative uncharacterized protein5073e-049
B9H4X9 Predicted protein4572e-043
A9P7U6 Putative uncharacterized protein4544e-043
Q10P22 Os03g0249900 protein4259e-040

Arabidopsis top hits (Blast detail)Scoree value
AT1G19990.1 unknown protein6057e-063
AT5G11600.1 unknown protein2454e-021
AT3G28770.1 unknown protein1863e-014
AT1G56660.1 unknown protein1721e-012
AT5G40340.1 PWWP domain-containing protein1451e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  100%

Unigene MembersMember information