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Information for unigene UN22240
| FASTA Sequence |
| Unigene ID: UN22240 | Length: 1124 |
| SNP | GGACTGAACACTCTCTCCTCTCGATCTATATCTTTCTAAGCTCTCTACATCGTCGTTTTCTCGTGATCATCGTTGATAAAAGATGG
CCAGAAAGTTCTTCGTTGGAGGCAACTGGAAATGCAACGGAACGAGTGAGGAGGTGAAGAAGATTGTGAACACTCTTAACGAAGCT
AAAGTACCTTCCCAGGATGTCGTTGAGGTTGTGCTTAGCCCTCCATATGTGTTTCTTCCTCTTGTTAAGAGCATATTGAGGCCTGA
CTTCCATGTTGCTGCCCAAAACTGCTGGGTTAAGAAAGGAGGTGCCTTCACTGGTGAAGTCAGTGCGGAGATGCTTGTGAACTTGG
ACATCCCATGGGTTATCCTTGGTCACTCTGAAAGGAGGGCACTCCTCAATGAATCAAACGAGTTTGTCGGAGACAAGGTTGCCTAT
GCACTTGCTCAAGGTTTGAAAGTGATCGCTTGTGTTGGTGAGACTCTTGAGCAGCGAGAGGCTGGATCGACCATGGATGTTGTGGC
TGCCCAGACTAAAGCTATTGCTGATCGTGTGTCGAACTGGCCAAATGTTGTTATAGCCTATGAACCAGTGTGGGCCATTGGAACCG
GAAAGGTCGCTAGCCCAGCTCAAGCTCAGGAAGTACATGATGAGCTTAGGAAATGGCTTGCAAATAACGTGAGTGATGATGTTGCC
GCTACAACCCGCATCATATACGGAGGATCCGTCAATGGTGGTAACTGCAAGGAGCTAGGTGGTCAGGCCGATGTTGATGGTTTCTT
GGTCGGTGGTGCTTCTCTAAAGCCCGAGTTTATCGACATCATCAAGGCTGCCGAGGTGAAGAAGAGTGCTTAATGAGTTTCACTAA
GCGACATAGCTTCCTTTTGCTTTTTCCAGTCTCAACTCTGATTTTAAAAAAATGAATAAGTTGATACAGTATTATTGTGATACTCT
TTGGTTCATGTGTATGTTTCCTTGAGAAGGCAAACAATCATTTTTTTCACCATTTACATTTAGCTGTGAGCTTACAAAAAATCTCT
CCCTTTGATGCTCTGTCCGTGTTCTTTAACTTCCGGGCTTTTTAATTAAAAGGAAATTAAGTTATATACAGCCCGATCGAGGAAGT
GTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876302 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1249 | 4e-135 |
| NP_191104 triosephosphate isomerase [Arabidopsis thaliana] | 1241 | 4e-134 |
| AAA03449 cytosolic triose phosphate isomerase [Arabidopsis thaliana] | 1236 | 1e-133 |
| P48495 RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM; Short=Triose-phosphate isomerase | 1178 | 7e-127 |
| ABK92459 unknown [Populus trichocarpa] | 1161 | 7e-125 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48491 Triosephosphate isomerase, cytosolic | 1241 | 2e-135 |
| P48495 Triosephosphate isomerase, cytosolic | 1178 | 3e-128 |
| P21820 Triosephosphate isomerase, cytosolic | 1125 | 4e-122 |
| P12863 Triosephosphate isomerase, cytosolic | 1084 | 3e-117 |
| P48494 Triosephosphate isomerase, cytosolic | 1072 | 6e-116 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P7V6 Triosephosphate isomerase | 1161 | 5e-125 |
| B9HTI4 Triosephosphate isomerase | 1161 | 5e-125 |
| A9PE68 Triosephosphate isomerase | 1152 | 5e-124 |
| D1LWT8 Triosephosphate isomerase | 1150 | 9e-124 |
| Q38JI4 Triosephosphate isomerase | 1145 | 3e-123 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55440.1 TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | 1242 | 1e-136 |
| AT2G21170.1 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 801 | 1e-085 |
| AT2G21170.2 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 737 | 4e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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