Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22242

FASTA Sequence
Unigene ID: UN22242Length: 1419  SNP
GGATCTTTCTTATATTATTATCTTTCGTTGATCTGTCTGTACAAGATCATACTTTCCCTTTAGTCCTCTGTTGAGAATCATCCAAT
TGAATCTTACGAAAATTTTAAGAAGATGAGGTCTCTTCAATCACCGATTGTTTGCCCTAGTGTTCGTCCCAGACAAGTGAGTGTGT
CTGCTTCGCTCGTCAACTCCACTGTTTCGAGACCTAGGCTTCTCAGGAACCGGTTTTGGGGTCATCAGACCAAAAACGTCAAGTCC
CAGGTTGCTACAGTGATAGTACGGAGTTGTAAGGGTATACAGTGTCTTTTCAGCTCTCATTCAGATGGTAACGGAAGCACAGCAGA
GAATTTCAACGAGAACGATGAAGATTATGTCAAGTCTAGTGTACTTGAATCTGCTGAGGTAAGAAGTGGACCAGATGGTTTTGTGG
TGAAGATGAGAGACGGTAGGCAACTTCGTTGTGTTCACAATAATCCTCAGGGTGGGAATCTTCCGAGTTATGCTCCACACTCTGCT
ATTGTGCTGAAGATGGAAGATGGAACTGGTCTTCTTCTTCCTATTATCGTCTTGGAGATGCCAAGTGTATTACTGATGGCAGCATT
GACTAATGTGAAAATAGCAAGGCCAACTATGTATGAAGTGGTGATGGAGATGGTAGAAAAAATGGGATACGAGGTTAGGCTTGTTC
GAGTTACCACAAGAGTTCACGAGGCGTATTACGCACAGTTATTTCTTTCAAAGGTGGGTGATAAGTCGGACTGTGTCAGCTTCGAT
CTTCGTCCTTCTGATGCTATTAATATAGCTGTCAGGTGCAAGGTACCCATCCAAGTGAACAAGTTTCTAGCTTATAGCGATGGAAT
GAGAGTCATCGAGTCTGGAAAGCTGTCAAAGCAAACACCTGCTTCAGATGGTTTATTACATACTGAACTAGACCGGCCAAATGGTC
AGCCTTGTCTTGATACAAAAGAGTTTGATCTCCTGAACAACATGATGCAAGCCGTTAATGAAGAACGGTATGATGAAGCAGCTGAG
TGGAGAGACAAGCTTGGCCAGTTTCAAGCGAAACGCAAACTAAGGAAATACACATGATCGACAGAGCAGTTCCGAGACAAAATGTA
TTTATAAAAGTAGTAGTATTATTGTAAATAATAAAGAAGCCATTGCTTAGAAGCTGCGATCAAAGTGATGGACATGGACGCTTCCA
ACCTTGCAAAAGAAATAATATATCTCGTGTGATGGAGAATACTCGTCTATCATACACATGTGCACGTTGTTAGTAAGTTCCTCGAA
GATAAAAGACATAAAATCTTGTATGTAGTGTTATCGTGTGAAACCAATCAGTGATGTGTACATACATAATCATACATTGATCATCT
CTCGTAATTAGATTAATAAATTATAGTGGAAAGTATTACTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893059 wound-responsive family protein [Arabidopsis lyrata subsp. lyrata]14818e-162
NP_564093 putative wound-responsive protein [Arabidopsis thaliana]14566e-159
AAM65561 wound-responsive protein, putative [Arabidopsis thaliana]14485e-158
AAF98407 Unknown protein [Arabidopsis thaliana]13544e-147
NP_177671 bifunctional nuclease in basal defense response 1 [Arabidopsis thaliana]13438e-146

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93VH2 AT1G19660 protein14564e-159
Q8LA58 Wound-responsive protein, putative14483e-158
Q9FWS0 F14P1.1 protein13543e-147
Q9FWS6 At1g75380/F1B16_1513435e-146
B9GRK6 Predicted protein11931e-128

Arabidopsis top hits (Blast detail)Scoree value
AT1G19660.1 wound-responsive family protein14572e-161
AT1G19660.2 wound-responsive family protein14572e-161
AT1G75380.1 wound-responsive protein-related13442e-148
AT1G75380.2 wound-responsive protein-related13442e-148
AT1G75380.3 wound-responsive protein-related13442e-148

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  11%
 
911  61%
 
112  11%
 
121  6%
 
62  11%

Unigene MembersMember information