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Information for unigene UN22249

FASTA Sequence
Unigene ID: UN22249Length: 1021  SNP
TTTTTGGGTTCAAAAAAGAAAAGCTCTCAGTCTCTATTTTTTTTCTCTACCACAGAAGCACCTAGAACCACAGAGAGAGAACTAAA
GGGGGTTTCTTTATTTAATTGTAAGAGTAAAAAGATGAAGGAGATGCAGGCGATAGAGACGTCACAGCCGACGGTGGCTGCTCCGG
CACCGGCAGTGGTGCATAGCCGACAGCTAGGGGCACAGCTGTCGGGAAGCATGAGTTTCAGCAGCCAAATGTCGAAGGAAGACGAG
GAGATGTCGAGGACGGCTTTGTCTGCTTTCAGGGCGAAAGAAGAGGAGATCGAGAAGAAGAAGATGGAGATTAGGGAAAGGGTTCA
AGCTCAGCTCGGTCGTGTCGAAGAAGAGACCAAGCGTCTCGCTTTGATCCGTGAGGAGCTTGAGGGTTTAGCTGACCCCATGAGGA
AAGAAGTTGCTTTGGTTAGGAAGAAGATTGATTCTGTCAACAAAGAGTTGAAGCCGTTGGGTCATACTGTTCAGAAAAAGGAACGA
GAGTACAAAGAAGCTCTTGAAGCATTCAACGAAAAGAACAGGGAGAAGGTGCAGCTCATCACCAAGCTTATGGAGCTGGTGGGAGA
GAGCGAAAAGGTGAGAATGAAGAAGCTGGAAGAGCTGAGCAAGAATATAGATTCTATACACTGACTTTGAATCCAAGACGAGAACC
AAAAGAAAGCTTCTTGGGGGCCAGAGACCATTCTCTGAGTGTTTTAACTCTACGTTTAGGTTTTGTGATGGTTGAATGTAATTTAT
ATTTTTATAATCGTCGTGTGTTATATTTGCTACTACTATCTTCTTCTGTTAGGGTTTTCTGGAGAATTTATAATGTTCTTTAGGAA
GTAACTTCAAAAAAAAATACTCATCGAGATAGGTTTGTAACTAAACACTACTCTCTTTCTTTCTTTGAATCCTCTTTCTCTTGTTT
GTGCCTTTATATAGTTGGACTTTACATTAATGTTCATACGTTCTTGCAGCATATAATGTACTTAGTACTAGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882648 hypothetical protein ARALYDRAFT_478325 [Arabidopsis lyrata subsp. lyrata]8193e-085
NP_187609 uncharacterized protein [Arabidopsis thaliana]8175e-085
AAF04425 unknown protein [Arabidopsis thaliana]7055e-072
XP_002326249 predicted protein [Populus trichocarpa]6761e-068
ABK93998 unknown [Populus trichocarpa]6624e-067

Swiss-Prot top hits (Blast detail)Scoree value
B1H222 RAB6-interacting golgin1452e-008
A5PKK7 RAB6-interacting golgin1433e-008
Q8BRM2 RAB6-interacting golgin1424e-008
Q5T7V8 RAB6-interacting golgin1415e-008
Q7T320 RAB6-interacting golgin1228e-006

TrEMBL top hits (Blast detail)Scoree value
Q8RXZ8 At3g099808173e-085
Q9SR63 Putative uncharacterized protein T22K18.217053e-072
B9MTP6 Predicted protein (Fragment)6767e-069
A9PC95 Putative uncharacterized protein6623e-067
C6SY78 Putative uncharacterized protein6623e-067

Arabidopsis top hits (Blast detail)Scoree value
AT3G09980.1 unknown protein8333e-089
AT5G03660.1 unknown protein6317e-066
AT2G36410.2 unknown protein6211e-064
AT3G52920.2 unknown protein6164e-064
AT2G36410.3 unknown protein6083e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1210  40%
 
63  12%
 
86  24%
 
104  16%
 
92  8%

Unigene MembersMember information