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Information for unigene UN22255

FASTA Sequence
Unigene ID: UN22255Length: 933 SSRSNP
CAGTTGTTCATTAATTACCACACACTTATAAACTGAAACCGAACAAACCAAATCCACATTTTTGAGTTATCATTTCCTTTCAGTCT
CTAAGGGAAAGGGAGAACGTAATTTTTCAAAGGCAAGCAAACAAACAAGGGTCCTTTGAGACAGGAATTACATTGGAGGATAAAGT
GGGTTTAGGTTCTTAGCTTTATGCTCGAAGAAGACCAACCAGAGCTTTTTTATTAGATACAGCGCGGGAAAAAGGTTTGACCAACA
TATCCACCGGTCATAGCTCTCCGCACATTGGTCTCAAAGAGCTTTGGGTTATCCCTTAAAACCTGTGCAGCTTCATGGTTCAAGGG
ATCTTCAGAGTTGGGTTCCGTGAAAAGATGGAAGAGACCATAGATAACAGTGTTAATGTTGAGAACAGGTTTCCAGTCTTCACGCA
AGATGTTGAGGCAAACGTTTCCTTCCAAATCGATATTGGGATGATAAACCTTGGTTTTGCATTTAACTTTAGGAGCTTCATGAGGA
TACACAGGAGAGACTTGGAAGGTGAAAGCAAACTTACCATTATGGTAGTAACCATCATCGGGTTTAATGGAGACTTCAAAGTTCAT
CAAATCATCTTTGCCATTGGGAAATGATATCGTGCAAGAGCTCGGAAGATTCAACTCTGATATATCTTTGTGGAGACGAAGTTCAC
CGGCAGATTGCTTCTTGACAGAAGCTCCTCCTCTGCTAGCGTTCTGAGCTTGTTCCCTTTGCTTCTCCTTTACTTTAAACAGTCCA
ATCATTGCTTCTTCAAGAAACTAACTCACACAACAGAAGTTTATCAATTCGATAAGAACACACAGATGATCGGAAGAGATATTACG
ACTGAATCTAAGGGTCGCCAATTCTCTCTCTCTCACCCACCGGATTCTCTTTTTTGTCGACGCTCGAGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33605 unnamed protein product [Thellungiella halophila]9618e-102
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]9601e-101
ACI16426 RUB1-conjugation enzyme [Brassica juncea]9447e-100
XP_002525098 ubiquitin-conjugating enzyme m, putative [Ricinus communis]8676e-091
XP_002886185 hypothetical protein ARALYDRAFT_343491 [Arabidopsis lyrata subsp. lyrata]8604e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc129605e-103
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like8342e-088
A3KN22 NEDD8-conjugating enzyme Ubc126065e-062
P61081 NEDD8-conjugating enzyme Ubc126065e-062
P61082 NEDD8-conjugating enzyme Ubc126065e-062

TrEMBL top hits (Blast detail)Scoree value
B6E0M7 Ubiquitin carrier protein9445e-100
B9SGH9 Ubiquitin carrier protein8674e-091
C6SV99 Ubiquitin carrier protein8568e-090
A9PAZ9 Ubiquitin carrier protein8495e-089
A5AHT5 Ubiquitin carrier protein8362e-087

Arabidopsis top hits (Blast detail)Scoree value
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9613e-104
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9613e-104
AT2G18600.1 RUB1-conjugating enzyme, putative8351e-089
AT5G56150.1 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2411e-020
AT5G56150.2 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2411e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
86  24%
 
611  44%
 
106  24%
 
122  8%

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