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Information for unigene UN22285

FASTA Sequence
Unigene ID: UN22285Length: 799 SSR 
GGATCCTTGCAAAAACCCTAATCCCTATCAGCAGAGCAGAGCAGCAGCAGCAGCAATGGATGCCACCAAAGAAGTCCCCGTCACCG
ATTTGAAGCGACCGAGAGAAGAAGAGGATGATAACTCCACCGCCGCCGTCGCTTCAATGGAGACGGATAACTCAGCTCCGGCTGCT
AACGGGGAGCAGACGAAGGAGCCAGCTTGTTTCTCCTCTGTGATTCCCGGGTGGTTCTCCGAGATGAGTCCCATGTGGCCAGGAGA
GGCACACTCTTTGAAGGTTGAGAAAGTTTTGTTTCAAGGCAAATCAGATTACCAAGATGTTATTGTTTTCCAGTCAGCGACATATG
GGAAAGTGTTGGTATTGGATGGAGTTATCCAACTTACGGAGAGAGACGAATGCGCTTATCAGGAGATGATCACTCATCTTCCTTTG
TCCTCTATCTCTAACCCAAAGAAGGTGTTGGTCATTGGAGGAGGAGATGGAGGTGTATTGCGGGAAGTTGCACGCCATGCTTCTGT
TGAGCAGATTGACATGTGTGAGATTGATAAAATGGTCGTTGATGTCTCTAAGCAGTTTTTCCCTGATGTGGCAATTGGATTCGAGG
ATCCTCGTGTCAACCTCGTCATTGGCGATGGTGTTGCTTACTTGAAGAATGCTGCTGAAGTTCATACGATGCAGTCATTGTTGATT
CATCAGATCCAATTGGTCCTGCAAAGGAGCTGTTTGAGAACCTTTCTTCCAATCCGTGGCTAGAGCTCTTCGCCCTGGTGGAGTTG
TGTGCACTCAGCTGAAAGCTTGTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890597 hypothetical protein ARALYDRAFT_889925 [Arabidopsis lyrata subsp. lyrata]8802e-092
NP_173794 spermidine synthase 1 [Arabidopsis thaliana]8773e-092
NP_973900 spermidine synthase 1 [Arabidopsis thaliana]8773e-092
Q9ZUB3 RecName: Full=Spermidine synthase 1; Short=SPDSY 1; AltName: Full=Putrescine aminopropyltransferase 18577e-090
CAO02391 spermidine synthase [Cochlearia officinalis]8309e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUB3 Spermidine synthase 18573e-091
O48661 Spermidine synthase 28233e-087
Q9ZS45 Spermidine synthase7363e-077
Q96557 Spermidine synthase 27302e-076
Q9SMB1 Spermidine synthase 17249e-076

TrEMBL top hits (Blast detail)Scoree value
Q3ED62 Putative uncharacterized protein At1g23820.28772e-092
A7DY57 Spermidine synthase8307e-087
Q5PNT7 At1g703108234e-086
C6THA0 Putative uncharacterized protein7581e-078
Q8GTQ5 Spermidine synthase7572e-078

Arabidopsis top hits (Blast detail)Scoree value
AT1G23820.2 SPDS1 (spermidine synthase 1); spermidine synthase8771e-094
AT1G23820.1 SPDS1 (spermidine synthase 1); spermidine synthase8771e-094
AT1G70310.1 SPDS2 (spermidine synthase 2); spermidine synthase8233e-088
AT5G53120.1 SPDS3 (SPERMIDINE SYNTHASE 3); spermidine synthase/ spermine synthase5868e-061
AT5G53120.2 SPDS3 (SPERMIDINE SYNTHASE 3); spermidine synthase/ spermine synthase5868e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
71  33%

Unigene MembersMember information