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Information for unigene UN22293
| FASTA Sequence |
| Unigene ID: UN22293 | Length: 830 |
SSR | SNP | GGGAAGAGCAGCAGTGAGAGAGAGAGAACCAATCGAATCGAGAGGAAGAAAAAATGGTGTCCGGGTCAGGGATATGCGCGAAGCGC
GTCGTGGTCGACGCAAGGCACCACATGCTGGGCCGTCTTGCTTCGATCATCGCCAAGGAGCTGCTCAACGGACAGAGAGTCGTTGT
CGTCAGATGCGAGGAGATTTGCCTGTCAGGTGGATTGGTTCGACAGAAGATGAAGTACATGAGGTTTATGAGGAAACGCATGAACA
CTAAGCCTTCTCACGGTCCCATTCACTTCAGGGCTCCCTCTAAGATCTTCTGGCGTACCGTTCGTGGTATGATTCCACACAAGACC
AAGCGTGGAGCTGCTGCTCTTGCACGCTTGAAGGTCTTTGAAGGAGTCCCACCACCTTACGACAAGGTCAAGAGAATGGTTATTCC
TGATGCTCTCAAGGTTTTGAGGCTCCAGGCTGGTCACAAGTACTGCTTGTTGGGCCGTCTTTCTTCTGAGGTTGGCTGGAACCATT
ACGATACCATTAAGGAGCTTGAGGTCAAAAGAAAGGAGAGGTCACAGGCTATGTATGAGCGTAAGAAGCAGCTCATCAAGCTCAGG
ACTAAGGCTGAGAAGGTTGCAGAGGAGAAGCTTGGATCCCAGCTTGATGTTCTTGCACCCATCAAGTACTGAGAATTGGCATCTAT
TATTTGGTTTAATACTTGCTTTGGTGCTCGTCTCGATTCTACCTTTTGAATTTTGTTTGTGCTTTTGGTAGCTTGTAAACTTAAAA
TATTGGAATGAGACATTTTGGTTTTTTGAATGAACAATCTGTTATGGTTCTTACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189127 60S ribosomal protein L13a-2 [Arabidopsis thaliana] | 1022 | 6e-109 |
| AAL87341 putative 60S ribosomal protein [Arabidopsis thaliana] | 1021 | 7e-109 |
| XP_002883564 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1016 | 3e-108 |
| NP_193053 60S ribosomal protein L13a-3 [Arabidopsis thaliana] | 1012 | 8e-108 |
| XP_002863167 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1007 | 3e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRX8 60S ribosomal protein L13a-2 | 1022 | 3e-110 |
| Q9SVR0 60S ribosomal protein L13a-3 | 1012 | 4e-109 |
| Q9SFU1 60S ribosomal protein L13a-1 | 1004 | 3e-108 |
| Q9FKC0 60S ribosomal protein L13a-4 | 996 | 3e-107 |
| O49885 60S ribosomal protein L13a | 919 | 2e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI8 60S ribosomal protein L13a, putative | 992 | 1e-105 |
| B9S526 60S ribosomal protein L13a, putative | 984 | 1e-104 |
| A9PB37 Putative uncharacterized protein | 982 | 2e-104 |
| B6VC51 60S ribosomal protein L13A | 982 | 2e-104 |
| A5BL45 Putative uncharacterized protein | 973 | 2e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24830.1 60S ribosomal protein L13A (RPL13aB) | 1023 | 2e-111 |
| AT4G13170.1 60S ribosomal protein L13A (RPL13aC) | 1013 | 3e-110 |
| AT3G07110.1 60S ribosomal protein L13A (RPL13aA) | 1005 | 2e-109 |
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 997 | 2e-108 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 997 | 2e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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