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Information for unigene UN22302
| FASTA Sequence |
| Unigene ID: UN22302 | Length: 869 |
SSR | | CTCAAGGAAATAGCATTTCAAGACTATTTTACAAATAATCAAAGGCTCAAGATGAGTTTCAAGCGTACAATAGAATCCGGAACCAA
TTATTGTCTCAAATAGATACCAGACACACAACTCTTTCATCAAACTCCAAGTTCTCACACACACACATACCTCTTCTTTTATTAGA
CGACATTTAATACATTCAAACACAAACAGAAGACAGTTCAGATTAACACACACCATTCATCTTCTTCCTCTCCTTCACAAACTTCC
TCCATCCAACAATGACTTCCATCAGAATGTCCCTTTCCACCTTTTTCCCTTTCACATTTCCGAAATCCTCTGCTCCCATCTTCTTG
GATATCTTGGAAGGCAAGGTGTCAAGCTCGTGAAGCACCTTCACAATATCAGCCACAAGTCTCTCCGCAAGTGTTCTTGAGAAATC
TTCCCTTATGACAACACGGAGAACCGTGATGTGTTGCGCATCCGCAGGCATGGTGTAAGCCGGGACAATCCAGCCAAAACGGCGTA
GCATCTCTGAGATCTCGAACTCGTTGTGGAAACTGTGGTCCTTGAGAGAGAAGGCTACCAGTGGCACTCCTACCTCCTTTGAGACT
ATGTTGAAACGCTCTGTTTTCTCGATCCCTTCTCTCAGAACCACCATGTTCTCTCTGCAGTTCTCCATCACGTTCTTGTAGCCCTC
GAAGCCAAGACGAATGAGCTGATAGTATTGAGCAATAATTTGGCTCGATCCCTTGGAGAAATTGAGAGTGAAAGTGGGTTGATCAG
CACCAAGATAGTTTATATGAAAGATGAGCTCATCAGGCAAATCCTGTTGTGTCCTCCACACGACCCAGCCAATACCCGCATAGACC
AGCCCATAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAS79669 glutamate decarboxylase 2 [Brassica juncea] | 1120 | 3e-120 |
| NP_001117556 glutamate decarboxylase 2 [Arabidopsis thaliana] | 1026 | 2e-109 |
| AAL91148 glutamate decarboxylase, putative [Arabidopsis thaliana] | 1026 | 2e-109 |
| NP_176771 glutamate decarboxylase 2 [Arabidopsis thaliana] | 1026 | 2e-109 |
| AAL16126 At1g65960/F12P19_12 [Arabidopsis thaliana] | 1022 | 6e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42472 Glutamate decarboxylase 2 | 1026 | 9e-111 |
| Q07346 Glutamate decarboxylase | 870 | 1e-092 |
| Q42521 Glutamate decarboxylase 1 | 795 | 6e-084 |
| P54767 Glutamate decarboxylase | 734 | 7e-077 |
| Q928K4 Probable glutamate decarboxylase gamma | 373 | 5e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6Q4I3 Glutamate decarboxylase 2 | 1120 | 2e-120 |
| Q56W28 Putative uncharacterized protein At1g65960 | 1026 | 1e-109 |
| Q8RXH0 Glutamate decarboxylase, putative | 1026 | 1e-109 |
| Q944L6 At1g65960/F12P19_12 | 1022 | 4e-109 |
| B9SR94 Glutamate decarboxylase, putative | 885 | 3e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65960.1 GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase | 1027 | 6e-112 |
| AT1G65960.2 GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase | 1027 | 6e-112 |
| AT2G02000.1 GAD3 (glutamate decarboxylase 3); calmodulin binding | 875 | 3e-094 |
| AT2G02010.1 GAD4 (glutamate decarboxylase 4); calmodulin binding | 843 | 1e-090 |
| AT5G17330.1 GAD; calmodulin binding / glutamate decarboxylase | 795 | 5e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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