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Information for unigene UN22304

FASTA Sequence
Unigene ID: UN22304Length: 784 SSR 
GGATTACCCACTCACATAGAAAAGAAAAAAAATACTCTAGAGAGAGAGAGAAATGGAAGGCAAGGAAGAAGATGTTAGAGTCGGAG
CTAACAAGTTTCCGGAGAGACAGCCCATCGGAACATCGGCTCAGAGCGACAAGGACTACAAGGAGCCACCTCCTGCTCCCTTGTTC
GAGCCAGGCGAGCTTGCTTCCTGGTCCTTCTGGAGAGCCGGTATCGCGGAGTTCATCGCCACGTTTCTTTTCCTTTACATCACTGT
GTTGACCGTCATGGGCGTGAAGAGGGCACCGAACATGTGTGCTTCTGTCGGAATCCAAGGTATCGCTTGGGCTTTCGGTGGTATGA
TCTTCGCTCTTGTCTACTGCACCGCTGGTATCTCCGGTGGGCACATCAACCCAGCTGTCACGTTTGGTCTGTTCTTGGCCAGGAAG
CTTTCGCTTACGCGAGCTGTGTACTACATAGTGATGCAGTGCTTAGGAGCCATCTGTGGAGCTGGTGTGGTGAAGGGTTTCCAGCC
TAAGCAATACCAAGCTCTAGGAGGTGGAGCCAACACTGTAGCTCCTGGTTACACCAAAGGGAGTGGTCTTGGTGCTGAGATTATTG
GAACCTTTGTCCTCGTTTACACCGTTTTCTCCGCCACTGACGCCAAGAGAAACGCTCGTGACTCTCATGTTCCCATTCTTGCACCT
CTCCCAATCGGATTCGCTGTGTTCTTGGTCCACTTAGCAACCATCCCCATCACTGGAACTGGAATCAACCCAGCGAGAAGTCTTGG
AGCTGCATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA64896 transmembrane channel protein [Brassica oleracea]12644e-137
BAA92258 plasma membrane aquaporin 1b [Raphanus sativus]12611e-136
AEA40491 aquaporin PIP1-3 [Brassica oleracea var. italica]12592e-136
ACA50530 putative aquaporin [Brassica napus]12582e-136
AAB61378 aquaporin [Brassica rapa subsp. campestris]12564e-136

Swiss-Prot top hits (Blast detail)Scoree value
Q06611 Aquaporin PIP1-212516e-137
P61837 Aquaporin PIP1-112427e-136
P61838 Aquaporin PIP1.112427e-136
Q08733 Aquaporin PIP1-312122e-132
Q39196 Probable aquaporin PIP1-412023e-131

TrEMBL top hits (Blast detail)Scoree value
A9X4U3 Aquaporin PIP112643e-137
Q39384 Transmembrane channel protein12643e-137
Q7GCI6 Plasma membrane aquaporin 1c12643e-137
Q9MBA0 Plasma membrane aquaporin 1b12617e-137
B1PRK2 Putative aquaporin12581e-136

Arabidopsis top hits (Blast detail)Scoree value
AT2G45960.1 PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel12516e-138
AT2G45960.2 PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel12516e-138
AT2G45960.3 PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel12516e-138
AT3G61430.1 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel12427e-137
AT3G61430.2 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel12427e-137

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  75%
 
81  25%

Unigene MembersMember information