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Information for unigene UN22326
| FASTA Sequence |
| Unigene ID: UN22326 | Length: 906 |
| SNP | GGTCTCTTATCTGAAACTAGAGACTGTTGTGAAAAGCAAAACTAAAGTCATCTTCTTAGTCACCAATCAATGGCGTCTCTGTCTTC
AATGCAGATGGTTCACACTTCTCGCTCTGTTGCTCAGATTGTTGTCAAATCGCAGTTAGTTTCTGCAAAGCAAACAACTCAATCAG
TTTGTGTCGGCGGTTCTGCATTGTCTTCGAGGCTACACTATGCAGCAAGTTTCCCTCTTAAGCAATTCTCCGGAGCTTCTTATGCG
ACCATCAAGAACCAAAGAACAGCTTGCGTTAAATCAATGGCTGCTGAGGAAGAAGAAGTGCTGGAACCACCTCAGGCTAAAGTGAC
ACACAAGGTTTACTTTGATGTGGAGATTGGTGGTGAAGTCGCTGGAAGGATTGTGATGGGTCTGTTTGGTGATGTCGTGCCTAAAA
CCGTTGAGAACTTCCGTGTCTTGTGTACTGGTGAGAAGAAGTATGGTTACAAGGGTTCTTCTTTCCATCGTATCATCAAAGATTTC
ATGATCCAAGGAGGTGACTTCACCGAGGGAAATGGTACTAGGAGGTATTAGTATCTACGGTGCCAAATTCGAAGACGAAAACTTCA
CATTGAAGCATACTGGACCTGGAATCTTGAGCATGGCCAACGCTGGTCCTAATACTAATGGAAGCCAGTTCTTCATTTGCACTGTC
CAAACTTCATGGTTAGATAACAAGCATGTTGTGTTCGGACAAGTCCTTGAAGTATGAAGCTTGTGAGACACTTGAATCTCAGAGAC
ACGCGCCTTCAATGTTCCCAAGAAAGTTGCAGAATCTATGCCTGTGGAGAGCTCCCACTTGAAGCTTGAAGCTTCATGTGTATCTT
TGTTTTGCTATTATGAGAGTTCAGTATGATGTCTATGTTTTATTTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001154684 Peptidyl-prolyl cis-trans isomerase CYP20-3 [Arabidopsis thaliana] | 689 | 3e-070 |
| NP_191762 Peptidyl-prolyl cis-trans isomerase CYP20-3 [Arabidopsis thaliana] | 684 | 1e-069 |
| AAG40378 AT3g62030 [Arabidopsis thaliana] | 684 | 1e-069 |
| AAM63944 peptidylprolyl isomerase ROC4 [Arabidopsis thaliana] | 681 | 2e-069 |
| NP_001190159 Peptidyl-prolyl cis-trans isomerase CYP20-3 [Arabidopsis thaliana] | 667 | 9e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34791 Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic | 684 | 5e-071 |
| Q41651 Peptidyl-prolyl cis-trans isomerase, chloroplastic | 358 | 3e-033 |
| Q6C4W6 Peptidyl-prolyl cis-trans isomerase B | 311 | 8e-028 |
| Q01490 Peptidyl-prolyl cis-trans isomerase B | 295 | 6e-026 |
| Q7S7Z6 Peptidyl-prolyl cis-trans isomerase B | 294 | 8e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GRV8 Peptidyl-prolyl cis-trans isomerase | 440 | 1e-041 |
| B9RN18 Peptidyl-prolyl cis-trans isomerase | 433 | 9e-041 |
| A5B9P8 Peptidyl-prolyl cis-trans isomerase | 400 | 6e-037 |
| C6TJK9 Peptidyl-prolyl cis-trans isomerase | 397 | 1e-036 |
| C6T2V1 Peptidyl-prolyl cis-trans isomerase (Fragment) | 378 | 2e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G62030.2 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) | 690 | 8e-073 |
| AT3G62030.1 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) | 685 | 3e-072 |
| AT5G13120.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 337 | 7e-032 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 296 | 4e-027 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 284 | 1e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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