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Information for unigene UN22362

FASTA Sequence
Unigene ID: UN22362Length: 1022 SSR 
GGAATCTGCGTTTTACACAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCAGGCTACGAAGATCAATATCCATGGCGATAA
GATCAGTCAAAGTTAGCAATCTCTCATCAGGAGCAACAGAGCATGGTATCAAAGAGTTCTTCTCTTTTTCCGGTGAAGTTGAAAGC
ATTGACATCCAAGGCAATGAGTATAGTGCTTATGTCACATTCAAAGATCCTCAAGGAGCGGAGACCGCTGTGCTCTTATCTGGTGC
AAGTATTGCTGATCAATCAGTCATCATTGAGATGGCTCCTAACTACACTCCACCTACTGCCCCTCATACTGAAACACAGAGTGGTG
GCGGAGGCGTGGCAGAATCAGATGCCCAGAAGGCAGAAGATGTTGTGAGCAGTATGTTAGCAAAGGGTTTCATCCTCGGTAAAGAC
GCGGTCGGCAAAGCGAAAGCGTTCGATGAGAAACTCGGTTTCACTTCAACGGCAACCGCAGGAGTTGCTTCTATAGACCAAAAAAT
CGGCCTAACCCAAAAAATCACAGCTGGTACAAGCTTGGTGACCGAGAAGATCAAAGGAGTGGACCAAAGCTTCCAGGTCACAGAGA
GGACCAAGTCTGCCTTTGCAACTGCGGAACAGACTGTGAGCAGCGCGGGAACGGCCGTGATGAAGAACCGTTTTGTATTAACAGGT
GTGAGCTGGGCGGCAGGAGCGTTCAACAGAGTTGCTAAAGCGGCTGGAGAGGTTAGTCAGAAAACAAAAGAAAAGGTTGAAGCTGA
GCAACCACCACAACCGTCGCAGACAGAGCATCAACCACCAGAAGGGTATTTTCCGATTCATTCGTTTGAATCGAAGCACTAATCTC
ATTACAGTGAAAAAGGTTGCATTTTCTTTTTCTTGTTGGTTTCTTTGATATGAAAAATGTGGGATTTTTTTTTTTGTCTTTTGGAT
TGTAACATAAAAGCTATGTTTGGATCTTCTACATTCCTAGTTCGTGTTTCTTATAAGATATCATATAGTATTCACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197186 binding partner of acd11 1 [Arabidopsis thaliana]10594e-113
XP_002871738 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]10585e-113
AAM64946 unknown [Arabidopsis thaliana]10569e-113
NP_001078596 binding partner of acd11 1 [Arabidopsis thaliana]10569e-113
AAL25562 AT5g16840/F5E19_180 [Arabidopsis thaliana]10542e-112

Swiss-Prot top hits (Blast detail)Scoree value
P87216 Protein vip11666e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LFD5 Putative uncharacterized protein F5E19_18010593e-113
A8MQX8 Uncharacterized protein At5g16840.310566e-113
Q8LB67 Putative uncharacterized protein10566e-113
Q93Z43 AT5g16840/F5E19_18010541e-112
A8MSB5 Uncharacterized protein At5g16840.210477e-112

Arabidopsis top hits (Blast detail)Scoree value
AT5G16840.3 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10681e-116
AT5G16840.1 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10592e-115
AT5G16840.2 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10474e-114
AT4G17720.1 RNA recognition motif (RRM)-containing protein6612e-069
AT1G67950.1 RNA recognition motif (RRM)-containing protein4937e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
101  50%

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