RadishBase

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Information for unigene UN22370

FASTA Sequence

Unigene ID:UN22370

Length: 925

GGCAAGAACGCAACTTGAGACTATCATAATCATCAAAGACGTTTTAAATTAAACAAAAAATACGAGACGAGAAACATGGGTAAAGA
ACAGAGTTTACGAAATAGCATATAGCAAAAAGCTAATCCAACACATACGATCTCAGAGACACTAGAAACTGAAAACTCAAAACATG
TCCCATGTAAACATAAAGCTTTCAAGCCAGCAACAAGCTTTAAGCGGCACCCTTGCCCTTCTTCTTTTGGATTTTCTTCTGGTAGA
ATTCTAGCTCCTTGCCTTCAAGAATGTATCCATCAGCACGTCCACATTGGCCGGGCCTTGAGGAGATGCAGGCCAACAACCTTCCG
CTTGCAAACTGGTCCTCAATGTGGGAATCAAGACTGCGACCTTCTTGACGGCTCTCAATCTTCCTCAGCACGTGGTTGCTCTTCTT
CACCTCCTCAGGAGCAGCAGCAGCTGGTGCAGCATCCTCACCATCCTCGCCTTCCTTCTTGGCGGCAGCAGGAGCACTCTTCTTCT
TGCGACCAACCTCAACACCATAGTGCTGCAAGTACCACTGCTTGAAAGGAGCGGCATCAACCTGAACAATGGCGCTCTTAACAAGT
GTCTTGGTACGGACAAGCTCGTTGTTGGAGGCGTTGTAGACAACGTCAAGGACTCTGGTCTTGCGGGTGACAGCTTCGCTTCCCCA
GGAGTAGTTACCGGTATCGAGCCTCAACGCACGCCACTTGACGTTACCTCCACGGACACGGATTCTTCTGACCGTCTTGTTGCTGG
AGAGCTTGGTGTTGGCTGGCTGCCTTCCCATCTCATACTTTCGCTTCTTCCTCCATCCCTTCTGCTTGCCTCCAGTGGCACGCCTC
TTGTGGATTGAGTCACGAGAAATACCCATGGTTGCAACTTAGGTTTTCTCTGTAGACAAAAAAAA

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
NP_197529 40S ribosomal protein S8-1 [Arabidopsis thaliana]	1044	2e-111
XP_002873989 ribosomal protein S8 [Arabidopsis lyrata subsp. lyrata]	1011	1e-107
ACU16398 unknown [Glycine max]	1009	2e-107
ACF06617 40S ribosomal protein S8 [Elaeis guineensis]	995	9e-106
BAJ89904 predicted protein [Hordeum vulgare subsp. vulgare]	993	2e-105

Swiss-Prot top hits (Blast detail)	Score	E value
Q93VG5 40S ribosomal protein S8-1	1058	2e-114
P49199 40S ribosomal protein S8	984	8e-106
Q08069 40S ribosomal protein S8	973	1e-104
O81361 40S ribosomal protein S8	934	5e-100
Q9FIF3 40S ribosomal protein S8-2	620	1e-063

TrEMBL top hits (Blast detail)	Score	E value
C6T3Z7 Ribosomal protein S8 (Fragment)	1009	1e-107
B3TM36 Ribosomal protein S8	995	6e-106
A1YKE4 Ribosomal protein S8	980	3e-104
C5XZ84 Ribosomal protein S8	973	2e-103
B4FE90 Ribosomal protein S8	964	2e-102

Arabidopsis top hits (Blast detail)	Score	E value
AT5G20290.1 40S ribosomal protein S8 (RPS8A)	1059	1e-115
AT5G59240.1 40S ribosomal protein S8 (RPS8B)	620	1e-064

EST library breakdown for ESTs in the assembly


6	7			27%


10	6			23%


7	2			8%


9	2			8%


19	3			12%


12	6			23%

Unigene Members