Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22377

FASTA Sequence
Unigene ID: UN22377Length: 1034 SSR 
CTGAACGGGATGAAGCGGGTTGCTGCCCTTTATATTTTTAGCTAAAATATGAAAAACAATCACAATAAAAATTAGAAAAATTTAGA
AGACTAAGAGTAATTTAGAAAAAAATTGTGAAATCGAACTCTTATATTTTGTTTTATTATCAAGTTTGGTGTTTTGAATTGGAGTC
ATTGGGGAAAACAGCAATGATAACAATAAAGGAAGGTCATGAATTGTTTTTTGTAAAGATCCAGAAGAGGAAGAAGACAAGGATCA
AGCAGCTTTGAGGAACTTCAAGGTCTCATCAATGTGTTTCTCAGGCTGGAACTGGTTGTTGTAGATGAGCTGAACGACACCGTTTT
TGTCAAGAACATAAGTCTGCCTCCCTGGCAATGCCCCAAACAGATCTCCAGGCACTCCCCAATCTTTCCTCACCTTATTCCCTTCG
TCACTCAACAATGTGTAAGGAAGCTTGTATTTGCTTGCAAAAGCCTTGTGAGAAGCAGAATCATCACCACTTATGCCAATGACCTC
TGCGCCGGCCTTCTTGAATTTCTCATAAGAGTCTCTGAACGCACAAGCCTGCTTGGTGCAGCCAGGGGTTTCATCTGCAGGGTAGA
AATATAGAACAACAGGCTTCCCTTTATACTTCTTCAGGCTCACCGGCTTTCCGTTTTGATCCTTTAGTGTGAAGTCTGGTGCAGTC
TGCCCCTTGTTAACCTTAGCAAAGATCGAGCTTTTGAAAGAACAGGGAGAGTAGAGGGGAGAGAGAGAGGTGGAGGGAGAGAGTCT
GAGACCAAAGAAGTTAGATTCTGATGATTTTGTGGGAACTGGAAACTGGGTTTTGGTGAGAATGGTGTTTCTCTGAGGAAGAGAGT
GCAGTGTGGTCTGACTAGAGAAAGTGAAAAATGTAGAACAAGAAGAAGAAGAAGCCATGTTTTTTTTTGTTCTCTCTATCAAAGAC
GTCTGCCACTAGCTTCACGCACTTCCTTCAAGTAATTGTGAAATGGAAGAAGATGATGAAGATAGGGAAAGATTGGTGACTGTGGT
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875301 hypothetical protein ARALYDRAFT_484368 [Arabidopsis lyrata subsp. lyrata]9725e-103
NP_189235 peroxiredoxin Q [Arabidopsis thaliana]9546e-101
NP_001189979 peroxiredoxin Q [Arabidopsis thaliana]9422e-099
XP_002326305 peroxiredoxin [Populus trichocarpa]7817e-081
Q6QPJ6 RecName: Full=Peroxiredoxin Q, chloroplastic; AltName: Full=Thioredoxin reductase; Flags: Precursor7791e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q9LU86 Peroxiredoxin Q, chloroplastic9543e-102
Q6QPJ6 Peroxiredoxin Q, chloroplastic7795e-082
Q6UBI3 Peroxiredoxin Q, chloroplastic7779e-082
Q9MB35 Peroxiredoxin Q, chloroplastic (Fragment)7446e-078
Q75SY5 Peroxiredoxin Q, chloroplastic7241e-075

TrEMBL top hits (Blast detail)Scoree value
B9MT31 Peroxiredoxin7815e-081
A9PJX8 Putative uncharacterized protein7798e-081
B9RR55 Bacterioferritin comigratory protein, putative7743e-080
A9PAI3 Peroxiredoxin7636e-079
C6T293 Putative uncharacterized protein7564e-078

Arabidopsis top hits (Blast detail)Scoree value
AT3G26060.1 ATPRX Q; antioxidant/ peroxiredoxin9552e-103

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
715  68%
 
84  18%
 
62  9%
 
111  5%

Unigene MembersMember information