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Information for unigene UN22378
| FASTA Sequence |
| Unigene ID: UN22378 | Length: 1110 |
| SNP | GCCTAAATTCAACATTGTCTCCCCTGGTGCTGATATGAGCATCTACTTCCCTTACACAGAGGAGAAGCGTAGGTTGACTAAGTTCC
ACCCTGAGATCGAGGAGCTACTCTACAGCGATGTTGAAAACCAAGGGCACTTATGTGTGCTCAAGGACAAGAAGAAGCCCATACTC
TTCACCATGGCTAGACTAGACCGTGTCAAGAACCTGTCAGGACTCGTCGAGTGGTACGGGAAGAACAAACGCCTGCGTGAGCTTGT
TAACTTGGTGGTTGTTGGAGGAGACAGGAGGAAAGAGTCGAAGGACAACGAAGAGAAGGCCGAGATGAAGAGAATGTATGACCTCA
TCGATGAGTACAAGCTGAACGGTCAGTTCAGGTGGATCTCTTCACAGATGAACAGGGTTAGGAACGGTGAGCTCTACCGTTACATC
TGTGACACCAAGGGCGCCTTCGTGCAGCCTGCGTTGTATGAAGCCTTTGGTCTTACTGTTGTGGAGGCCATGACCTGTGGTTTGCC
GACTTTCGCCACTTGCAAAGGTGGTCCGGCTGAGATCATCGTGCACGGCAAATCTGGCTTCCATATTGACCCTTACCATGGTGATC
AGGCTGCTGATACTCTTGCTGACTTCTTCACTAAGTGTAAGGAAGATCCATCTCATTGGGATGAGATCTCGAAGGGAGGGCTTCAG
AGGATTGAGGAGAAATACACGTGGCAGATATACTCACAGAGGCTTCTGACATTGACTGGTGTGTATGGATTCTGGAAGCATGTATC
GAACCTTGACCGTCTTGAGAGCCGTCGTTACCTTGAGATGTTCTATGCATTGAAGTATCGCCCACTGGCTAAGGCTGTTCCTCTTG
CCGAGGAGGAATGAAGGAGATGCGGAACCATTATAAAGAGCTTGAAGAGAGAAAGAGCTTGCAGTGTGTGAAGAAGAATAAAAAAA
AATCTCTTTTGATTCTTACTGTCATTTTGATTTTAGGAGCGCTTTTGCTTCTTTGTTATTTCAATCCATTCGTCTTTGTTTTTATT
TGATCATTTGCCTCTCAGGCAAGGCTAATGCGTTGTATTCTGATTGTTGAGAGAATGAAATTTCTATTTTTCTATCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197583 sucrose synthase 1 [Arabidopsis thaliana] | 1490 | 5e-163 |
| 3S28 Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose | 1490 | 5e-163 |
| XP_002874016 hypothetical protein ARALYDRAFT_910122 [Arabidopsis lyrata subsp. lyrata] | 1486 | 1e-162 |
| CAA50317 sucrose synthase [Arabidopsis thaliana] | 1460 | 1e-159 |
| 3S27 Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. | 1448 | 4e-158 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49040 Sucrose synthase 1 | 1490 | 2e-164 |
| P13708 Sucrose synthase | 1349 | 5e-148 |
| P31926 Sucrose synthase | 1328 | 1e-145 |
| Q01390 Sucrose synthase | 1321 | 8e-145 |
| O65026 Sucrose synthase | 1310 | 2e-143 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94CC8 Putative sucrose synthase | 1443 | 9e-158 |
| Q9LXL5 Sucrose synthase-like protein | 1443 | 9e-158 |
| Q56WF2 Sucrose-UDP glucosyltransferase | 1431 | 2e-156 |
| Q9SLS2 Sucrose synthase | 1388 | 2e-151 |
| Q9SLY1 Sucrose synthase | 1375 | 7e-150 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20830.1 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase | 1491 | 1e-165 |
| AT5G20830.2 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase | 1491 | 1e-165 |
| AT3G43190.1 SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 1444 | 4e-160 |
| AT4G02280.1 SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 1081 | 5e-118 |
| AT5G49190.1 SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 1068 | 2e-116 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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