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Information for unigene UN22390

FASTA Sequence
Unigene ID: UN22390Length: 1763 SSRSNP
GGAAGGTGTGGTGGTAACTGGAAAGAGATCTTTGTCGGAGATTTGTTAAAAGGTTGAGGAGAGAGAGAGAGAGAGAGAGAGGATGA
GTGGGGAAGATGCGGCGAAGACGGGCAAAATAGTGGTGTGGTGGGACATGAAGGACTGTCCGGTTCCAGAGGGTATTGATGCTCAT
CGTGTTCGTCCGAGCATAGAAGGTGGGTTCAGACAACTAGGCTACTCTGGTCCTGTCTCCATCAGAGCCTATGGAGACCACAAACA
AACCCCTGACCACCAGCTACAAGCTCTCTCTTCCACTGGAGTCGTGGTGGTACATATCAGATCTGAAAGCACGTGCGCAGTCATGT
ATATGGATATGGTGAAATGGCGAGAGGATAATCCTCCTCCGGCTACAATGATGATGATAACCAATCAGATGCTAGATGTTTTCCAT
TGGGATCTGGCCCGGCTTCAACAACGCACGACTTACAACCTTTTTCTGGCTTATTCAGTCCAACCTCGCGCAGTATTGTACGTTCA
CACTCGTAAAGAGTGGCTCTGGGAAAAATTACTACTTGGGACGACTGCGGCCGTGACAAGCAGCAGCGCAGACACGACGGCCGGAT
GATGCCGTGTTTCACTGCAAAACGTGCTCTTTGGATTGCCTAAGCCTTAAGAGTTTCAAGGAGCATCTCTCCACTAAAAATCATGC
ACTAGAAGAGGTTTTACACCCTACGCCTACAGAAATCATATCTGTAACGAGCAAGTGGGGAAAGAACTATGCTGCTACGCCTGAAT
ATGCGACAGCTAAAATCCATGTGTGTTGGAACATGTCTGAATGTCCTATTCCCGACGGTTACGATGCTCGTCGGGTCCGTCCCAGT
TTGGAAGGAGCGTTCAAGGAACTAGGCTATTCTGGTCCTGTCTCCATCACTGCCTTTGGTGACCATAAAAAAACCCCCAAAGGCCA
CCTTGAAGCCCTCTCTTCCACTGGAATCGATGTTGCACATGTCATTCAGGAAGTCATATTCTCGCGCATGTCTAAAGATTTGACGA
ATTGGGGATATGACAATCCCGCTCCGGCTACAATGATGATCATATCGGATGGCGCTGAGTATGTCTTTGGAGATTCTATTGCCCGG
CAACAACAATTTAATAAGTACAACCTGTTTCGGGCTTATTCTTTTAGGCCTCGTGAAATGTCAATCCTGCTCACTTCTGCCGAGTG
GCTCTGGGATAGCTTACTTGCAGTTTCAGAGACAAGAAGACATGATTTCCTTCGGAAGTGCAGTGGAAGTAGTATTGAAAGGGTTG
GTGAATCTGCCGGAATGTTTTATTGCAAAGTGTGCTACTCTGATTTCAAACTCCTGGATGAATTCATCAGACATCTCTGGACTTTA
AATCATCTCTGTGATGAGGAGGATATTTGTGATCGTTTTCGACATAACAACCACATGAGACTGCTATCGCTCGCGAAAGCTCTTTT
CCCAGAGAGCAAGGTGTTGACGAAAGCTGCCCAGTAGAGGTTGCGACTGAAGAAGTGATCAGAGTTTAATCCTATGAACCTATCTT
TATTTTTCTTGTTCTGGTCTTATGTTTCTCTGCTTGAAGTACTTTAGTTACTTTTCGGACTTACTTTTTTCTCGCTTGTTTAATTC
ACCAAACAATATAAGTTTAATCGTGTTACTGTATGTGTATTTGCAATGGGCCTAACGGTTATTATTTTAGTGTTTCTTTACGATGC
TACATTGAATCTTTTTGTGTATTAAACCTTCTTTCTTTATACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878481 predicted protein [Arabidopsis lyrata subsp. lyrata]6762e-068
XP_002885669 hypothetical protein ARALYDRAFT_319176 [Arabidopsis lyrata subsp. lyrata]6548e-066
XP_002864595 hypothetical protein ARALYDRAFT_332172 [Arabidopsis lyrata subsp. lyrata]6351e-063
NP_191844 zinc finger protein-like protein [Arabidopsis thaliana]6271e-062
XP_002883443 hypothetical protein ARALYDRAFT_342502 [Arabidopsis lyrata subsp. lyrata]3724e-033

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LZI1 Putative uncharacterized protein F26K9_2806277e-063
B9RFQ6 Nucleic acid binding protein, putative2665e-021
Q9FNP6 Emb|CAB71880.12532e-019
B9I6D1 Predicted protein (Fragment)2486e-019
C5X3B3 Putative uncharacterized protein Sb02g0406002405e-018

Arabidopsis top hits (Blast detail)Scoree value
AT3G62850.1 zinc finger protein-related6274e-065
AT5G61190.1 zinc finger protein-related2539e-022
AT3G62200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 3380 Blast hits to 2820 proteins in 272 species: Archae - 0; Bacteria - 93; Metazoa - 1555; Fungi - 720; Plants - 473; Viruses - 42; Other Eukaryotes - 497 (source: NCBI BLink).2403e-020
AT3G62210.1 EDA32 (embryo sac development arrest 32)2385e-020
AT5G09840.1 unknown protein2109e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  14%
 
98  57%
 
113  21%
 
81  7%

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