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Information for unigene UN22399
| FASTA Sequence |
| Unigene ID: UN22399 | Length: 877 |
SSR | | AGGCATAACATGTCTCATATTATAGACTTTGAAGCAAATATGTTTATGGCTCATAGAAGGGAAAATAAGCCTTAGAAGTGGGGAAA
CACAAATGAAAAGGGTTAAAGAAATGCAAGTGAACTACAAAAGAGGACCAACAGGGAGTCTCTGCAACTCAAAACTATGTAGTGAG
TTCCATAATGGCAGAAACGATATCTCCATCATTAGTCTTAAGAGCCTTAACAGCTTTGGTCTTAGAGACACCAGCTTGAGTCATCA
CAAGATCAATGTCCTTAGCTTCAACACCAGTCTCATCAACATCATCATCATCATCTTCCTCCTCTTGTGCAACAGTGGCTGCTTGA
GAGGCATCAGCGTTGCTGGGGATCATAGACGCAACATCAGGCATCTTGAACCTCTGAGCAGCTTGGGCTTGTAGCTGTGAGCTCAT
GTCATCAATCTTGGCCTCGCCGAATATCACATAGGTGTCAGAGTTGGGACTCTTGAACACATCAGGCTTCGAGATGACAAACAGAA
CATTCTTTGATCTCTTGATTGTGACTCTGCTAACATCAGTGACAGGTTTCATTCCAAGTTTCAGCATTGCTTTGCGGCTTTTCTTC
TCGCTTCGGCTTTGCTTGGAGCTCTCATTCTCACCAGCTCCATCGACGTTGTCATCGTCGTCGTCCTCATCGTCGTCTTCATCTCC
GTCTTTTACATCCTCAACGACAACATCATTTTCCTTCTGGAGCTTTATTTGCTCTTTGATGGCATCCATCAATTGCTCCTCAGTGT
TAACTTCTTCAACGACTGGGCCTGGCATCTTCTTCACCCTCTTTCTTATCTTCTCTTCTCTTCTTCCTTCGTAACCAACGAAACCC
TTGGAACAGCGCAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874632 hypothetical protein ARALYDRAFT_489891 [Arabidopsis lyrata subsp. lyrata] | 917 | 9e-097 |
| NP_192786 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 905 | 2e-095 |
| NP_001078369 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 901 | 7e-095 |
| NP_564415 Nascent polypeptide-associated complex subunit alpha-like protein 5 [Arabidopsis thaliana] | 767 | 2e-079 |
| XP_002891026 hypothetical protein ARALYDRAFT_473483 [Arabidopsis lyrata subsp. lyrata] | 767 | 2e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 905 | 1e-096 |
| Q8LGC6 Nascent polypeptide-associated complex subunit alpha-like protein 5 | 767 | 1e-080 |
| Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 651 | 3e-067 |
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 615 | 4e-063 |
| Q9M612 Nascent polypeptide-associated complex subunit alpha-like protein | 576 | 1e-058 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWN5 Putative alpha NAC | 905 | 2e-095 |
| A8MQP6 Uncharacterized protein At4g10480.2 | 901 | 5e-095 |
| B9IDG2 Predicted protein | 670 | 3e-068 |
| A9PB21 Putative uncharacterized protein | 668 | 5e-068 |
| B9S5M4 Nascent polypeptide associated complex alpha subunit, putative | 649 | 7e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 916 | 5e-099 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 912 | 1e-098 |
| AT1G33040.1 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) | 773 | 2e-082 |
| AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 662 | 1e-069 |
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 621 | 8e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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