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Information for unigene UN22432

FASTA Sequence
Unigene ID: UN22432Length: 1810 SSR 
CCCCAACTATAGCCATTCATCACTCATTCCATAATTCATGTATAATAAACATAAGTCACAAGCCAACGGAAAGAAGAAGAAACATA
CAACAAACATTGGAAACTGAAATTAGATATACGTCTTGACTGAGCATTCCTCTTGAGCGACAAAAGCCGCATTAAAACACGTCAGG
ATGAAACCGTCCCGGGATTGACCCGTTGTTCTGCTGCGCTTGTTTCAAATGAAGCGTGAGAGCATAGTTATTCACCTCGAGAGTCC
TCAGCTGCTCCTGGTACTGAGTGACCATCTGCCTCAGATGCTGCAGCTCCTGGCTTTGATCTTCACTCTCTCTCTGCCGCTTCTGC
TGCGTCACCACAGCTCGTTTCAGCAACTGTCTCCTGGACGATAGCTTCTAACTGCTGCTCAGCATCGAGTCTCTGCTGGAGACTGC
TGCTCTGCGCCGCGTCGGCACCACCAGCACGTGCTTGATCGACTTCTCCAAAGCTTCTAACGCTCTTGCGGCACGGTCTTTCGCGT
CTTTCATGTCTGAAGCACTCATCATCTCCCTCACGAAGAGGTCAACCCACTCAGCGCCATCCATGTTCAAGACTTCCTCCTTCCCT
TGCTGCTGAGCCTGAGGAGCTTCAACTTTTGCTTCCTCCTGGATAGATGATTCTGAGTTCTTATTGGTTGATTCTAAACGAAGCTG
ATTCAAACATCTAATCGCTGAATCAATATCATCTCCACATTCCTCAATTGCCCTCTCAAGAATCTGATGATCCATATCGGGGAAAA
TCGCGGCGAGGTGATTGAGGAGGAGCGAGGAGGAGGAGGGAGGAGGTGGGGGGAAACGAGGGGGAGAAGAGGAAGAAAAGCAACGG
AGTTTCTTGGAGACGGGAGGCGAAGAAGAAGAAGAAGGAGAAGCGGCGGACAAATCCTCGAACAGAGATCTCTTGCTACCGCAAAC
AATTGCAGACATGTTATCTGCTTCCACCACCTTCTTTCTTTTTTTTTCTTTCTTTCTTTCTTAGCTTCTTCCCTTTCAGATCTCAA
CCTTTCCTTTTTGTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATGGTTTTTTCGTGTTGTCAAAGAGTTGAACTATGAAAAT
AGATGGCGAGTGCCTGATCGGATTGATCAGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATA
CATCACTGCACTTCCACTTGACACCTATCGTAATGATAAACGGCTCGTCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGT
CACTCCATCCCCGCAGGGGCGGAGAACCCGTTGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACT
CATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATA
ACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGG
ACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCC
CAGGTGGCGAAGAGCCGACATTGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTA
ACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCCGGCC
CGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868389 hypothetical protein ARALYDRAFT_493566 [Arabidopsis lyrata subsp. lyrata]8653e-090
AAK43955 unknown protein [Arabidopsis thaliana]8601e-089
NP_568521 Ubiquitin system component Cue protein [Arabidopsis thaliana]8591e-089
NP_001190418 Ubiquitin system component Cue protein [Arabidopsis thaliana]8582e-089
YP_358637 hypothetical protein PhapfoPp091 [Phalaenopsis aphrodite subsp. formosana]6521e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9PLI5 Uncharacterized protein TC_01143013e-026

TrEMBL top hits (Blast detail)Scoree value
Q94K99 Putative uncharacterized protein At5g324408607e-090
Q8H1Q3 Putative uncharacterized protein At5g324408599e-090
Q3BAI1 Putative uncharacterized protein rps126521e-065
B3H6U1 Uncharacterized protein At5g32440.25588e-055
A5AX71 Putative uncharacterized protein3624e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G32440.1 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).8846e-095
AT5G32440.2 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5827e-060
AT1G80040.1 unknown protein3765e-036
AT5G02510.1 unknown protein2521e-021
AT1G80040.2 unknown protein2125e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information