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Information for unigene UN22465

FASTA Sequence
Unigene ID: UN22465Length: 1020 SSR 
GGGCGTTTTACACAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCAGGCTACGAAGATCAATATCCATGGCGATAAG
ATCAGTCAAAGTTAGCAATCTCTCATCAGGAGCAACAGAACATGGTATCAAAGAGTTCTTCTCTTTTTCCGGTGATGTTGAAAGCA
TTGACATCCAAAGCAATGAGCATAGTGCTTATGTCACATTCAAAGATCCTCAAGGAGCAGAGACCGCTGTGCTCTTATCAGGTGCA
AGTATTGCCGATCAATCAGTCATCATTGAGATGGCTCCTAACTACACTCCACCTACTGCCCCTCATGCTGAAACACAGAGCGGTGG
CGGAGGCGTCGCAGAATCAGTTGTCCAGAAGGCAGAAGATGTTGTGAGCAGCATGTTAGCGAAGGGTTTCATCCTCGGTAAAGACG
CTGTCGGCAAAGCAAAAGCTTTTGATGAGAAACTCGGTTTCACTTCAACGGCAACCGCAGGAGTTGCTTCTATAGACCAAAAAATC
GGCCTAACCCAAAAAATCACTGCTGGTACAAGCTTGGTGACCGAGAAGATCAAAGGAGTGGACCAAAGCTTCCAGGTCACAGAGAG
AACCAAGTCTGCCTTTGCAACTGCGGAACAGACGGTGAGCAGCGCGGGAACGGCCGTGATGAAGAACCGTTTTGTATTAACAGGTG
TGAGCTGGGCGGCAGGAGCGTTCAACAGAGTTGCTAAAGCGGCTGGAGAGGTTAGTCAGAAAACAAAAGAAAAGGTTGAAGCTGAG
CAACCACCACAACCGTCGCAGACAGAGCATCAACCACCAGAAGGGTATTCTCCGATTCATTCGTCTGAATCGAAGCACTAAATCTC
ATTACAGTGAAAAAGGTTGCGTTTTCTTTTTCTTGTTGGTTTCTTTGTTATGAAAAATGTGGGATTTTTTTTTGTCTTTTGGATTG
TAACATAAAAGCTATGTTTGGATCTTCTACATTCCTAGTTCGTGTTTCTTATAAGATATCATATAGTATTCACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197186 binding partner of acd11 1 [Arabidopsis thaliana]10935e-117
XP_002871738 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]10926e-117
AAM64946 unknown [Arabidopsis thaliana]10901e-116
NP_001078596 binding partner of acd11 1 [Arabidopsis thaliana]10901e-116
AAL25562 AT5g16840/F5E19_180 [Arabidopsis thaliana]10882e-116

Swiss-Prot top hits (Blast detail)Scoree value
P87216 Protein vip11542e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LFD5 Putative uncharacterized protein F5E19_18010933e-117
A8MQX8 Uncharacterized protein At5g16840.310907e-117
Q8LB67 Putative uncharacterized protein10907e-117
Q93Z43 AT5g16840/F5E19_18010881e-116
A8MSB5 Uncharacterized protein At5g16840.210818e-116

Arabidopsis top hits (Blast detail)Scoree value
AT5G16840.3 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase11022e-120
AT5G16840.1 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10932e-119
AT5G16840.2 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10814e-118
AT4G17720.1 RNA recognition motif (RRM)-containing protein6854e-072
AT1G67950.1 RNA recognition motif (RRM)-containing protein5062e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
101  33%

Unigene MembersMember information