 |
Information for unigene UN22505
| FASTA Sequence |
| Unigene ID: UN22505 | Length: 864 |
SSR | | GGAACACTGAACAGAGAGAGAGAGAGATCTTAGCTAAACTAAATCAATGGCGGCGACGATTGTAAAGGCTGGACTTTTCGCCGCCC
TTCCTCTCCGTGGTCAAGTCCCTCGTTGCTTCTCCTCTTCATTGAAAACAACGACTACGGTAGTGGCAGTTTCTCGATCTCTTGGA
ATCTCTGCCGTTAATAACCATCACCGTCGAAGCTCCTGGCCTCGAGTTACTACTTTCTGCACGGCGGCGACGACGGTTTCAGCGGA
TGAACCGGAGAAGAAGCTCGAGGCTGTGGAGGAGGTGGAGGAGAATGTGAAGGAGACGGCGAATCTGTTAGACATAAGAGTAGGAA
GAATTGTGAAAGCTTGGCAACACGAGGAGGCTGATTCTCTGTATGTTGAAGAAGTCGATATAGGTGAAGCAGAGCCAAGAATCATC
TGCAGTGGTATCGTCAAATACGTACCTCTCGATCTCCTTCAGGGTGCATCAGTTGTGGTGTTGGCTAATCTGAAGCCAAGAAACAT
GAGAGGAGTCAAGTCATGTGGCATGCTACTCTGTGCTTCCGACTCTGCTCATGAGAATGTTGAGCCTCTTGTTCCACCACAAGGGT
CTGTTCCTGGGGATAGAGTTTGGTTTGGTAATGAAGAAGATCTTGAGCAGCTTCCTGACCTGCACCTCCTAACAAGGTTCAGAAGA
AGAAGATGTGGGAAGCGGTTCAACCGCTGTCGAAGACTGATGATTCTTGTGTTTCGATGCTTAAGGAGCATTTGATGCGGACATCT
TCTGGTCTTGTTACTTCCAACACTTTGAAAAATGCCAACATTTCTTGATTTACTGTATTTTTTTTCAGAGAGAGATTGAGAGAGAT
AAAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191557 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] | 779 | 9e-081 |
| XP_002878307 tRNA-binding region domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 771 | 8e-080 |
| XP_002529219 methionyl-tRNA synthetase, putative [Ricinus communis] | 494 | 1e-047 |
| XP_002280840 PREDICTED: hypothetical protein [Vitis vinifera] | 483 | 2e-046 |
| XP_002331598 predicted protein [Populus trichocarpa] | 479 | 5e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7ZX51 Tyrosyl-tRNA synthetase, cytoplasmic | 326 | 1e-029 |
| O54873 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 | 323 | 3e-029 |
| Q6DIJ1 Tyrosyl-tRNA synthetase, cytoplasmic | 319 | 9e-029 |
| Q29465 Tyrosyl-tRNA synthetase, cytoplasmic | 317 | 2e-028 |
| Q5R8T5 Tyrosyl-tRNA synthetase, cytoplasmic | 309 | 1e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M1X8 Putative uncharacterized protein | 779 | 6e-081 |
| B9STA0 Methionyl-tRNA synthetase, putative | 494 | 7e-048 |
| B9N8K9 Predicted protein | 479 | 4e-046 |
| C6SX59 Putative uncharacterized protein | 471 | 3e-045 |
| C6TED6 Putative uncharacterized protein | 463 | 3e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59980.1 tRNA-binding region domain-containing protein | 779 | 4e-083 |
| AT2G40660.1 tRNA-binding region domain-containing protein | 271 | 3e-024 |
| AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative | 255 | 2e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
