Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22529

FASTA Sequence
Unigene ID: UN22529Length: 1577 SSR 
GGGAATTTTCTGCAAACACACATCCTTCTCAGAAGAGTAGATCAAAAGGTTGTTGTTGTTGTTAACCCGATCTCGGAATCGAGATT
GATCTGTGACGAGTCTGCTTACCGATTGTTTGTTCGTCGCCTTCTCTTCTTCACCCCGGCGAAGATGAACGGCGGTCCCTCCGGTT
TCCATAATGCTCCGGTAACGAAAGCCTTCGTCATCACGAGCGCTCTTTTCACCGTCTTCTTCGGGATCCAGGGCCGTTCTTCCAGT
CTCGGCTTGTCTTACCAGGATATTTTTGAGAAGTTTCGAATATGGAAGCTAATCATGTCGACTTTTGCATTCTCCTCCACACCAGA
ATTGATGTTCGGACTGTATTTGCTCTACTACTTTCGTGTTTTTGAGAGACAGATTGGCTCGAATAAGTACTCAGTGTTTATCTTGT
TCTCAGGGACTTTGTCACTTCTACTAGAGATCGTTTTGCTATCACTGCTTAAAGATACCACAGCGAATTTACTTACCTCTGGACCA
TACGGCCTGATATTTGCTTCGTTTATACCCTTCTACTTGGACATCCCAGTTTCAACAAGGTTTCGCGTATTTGGTGTCAACTTCTC
CGATAAGTCATTCATATACCTTGCAGGAGTCCAGCTTCTACTATCCTCTTGGAAAAGATCCATCTTTCCTGGAGTTTGCGGCATAA
TTGCTGGTTCCCTGTATCGTTTGAACATCCTCGGCATCCGAAAGGCCAAGTTCCCCGAGTTTGTTGCTTCGTTCTTTTCAAGGCTT
TTTTTGCCGTCCTTCAGTAGCGCTTTTCCTCCAGCACCAATCAGAAACATCGTTGGGACTATATCACCCAACACAGTTCGCCGAGC
AGAGAGATTTCGGCCAGCTCCAATGGCGTCAAGTGTGGATCCATCTGAAGAAGCCATAGCTACATTGGTATCAATGGGTTTCGACA
GAAATGCTGCAAGACAGGCACTCGTGCACGCCAGAAATGATGTCAACGCCGCCACAAACATCCTTCTTGAAGCACAATCTCACTAA
TTCAATCTGTATCAGAAAACAAGGAGTTCCTTTGTTGCTGTTGGATCAACCTTGGAGGCAACATGTCTCACTGTATATGATCAGAC
TAAAGACCTTACCAACTTTCTCTCTTTCCATTTCTAGTCTAGGATGAGTTGCATAGGTTTATGTAGCACAGATTTGCTGGTTAAGA
GAAACACTGAGAAATTATCTATTTGAAACCTCGAAAACATTACAAATCTTATTACATCTGTTCCTCGCAAAATACATTCTATACAA
TAACCACCTGGAAACTACAGTGAGTGTTTGGGGCACAACACACTTTAGCTTACTGTTTCTTTCTTTTTGTCCATGGTATACACAGG
TATCTCCCAATTCTTGTTCTTTTTGGGATCATCAGTCAAGGGGAAATCTGTTTCGTACTCTCTAAACGTTTTGAGGAATGTTTTGG
CTCCCATCATTACCAGTCTCTCCACCATGAACAACTGGTAATTATTCTTGATTATAGGATCCAAAATCTCCCTAAAGTTCGATGAA
TAAGCCAGTTTGTACCCGATGGCGAAAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191233 Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]13941e-151
XP_002876380 ubiquitin-associated /TS-N domain-containing protein [Arabidopsis lyrata subsp. lyrata]13788e-150
XP_002282506 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]11224e-120
ACU18523 unknown [Glycine max]11152e-119
NP_850346 Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]11125e-119

Swiss-Prot top hits (Blast detail)Scoree value
Q9UTK7 UBA domain-containing protein 141589e-010

TrEMBL top hits (Blast detail)Scoree value
Q9LET3 At3g5674013947e-152
C6T9M1 Putative uncharacterized protein11152e-119
Q8RXQ2 Putative uncharacterized protein At2g4117011124e-119
B7FJZ2 Putative uncharacterized protein10792e-115
Q2HSZ5 UBA-like10749e-115

Arabidopsis top hits (Blast detail)Scoree value
AT3G56740.1 ubiquitin-associated (UBA)/TS-N domain-containing protein13953e-154
AT2G41160.1 ubiquitin-associated (UBA)/TS-N domain-containing protein11382e-124
AT2G41150.2 unknown protein3585e-034
AT3G56750.1 unknown protein3523e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  14%
 
125  71%
 
81  14%

Unigene MembersMember information