Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22533

FASTA Sequence
Unigene ID: UN22533Length: 1355  SNP
GGACCCATATGAGCCATAGTTAGCCATAGTCAATACTAGCGAAGCTGAGGAAATCTGAGAAAGAAGGAAGGAAGGAAGGATGAAGA
AGATATCGGTGGTTCTCATGGGCTGTGGAGGCGTTGGCCGACAACTTCTGCAACACATTGTCTCTTTCCGATCCCTACACGCCAAA
ATGGGAGTTCATATACGTGTGATTGGAGTCAGTGACAGTAAATCCTTACTTGTTCCAGTGGATGTGGTCAAAGAGGAACTTGATGA
TGATCTCTTGTCAGTTGTTTGCCGTCTCAAATCTGCTGGTTCTCCGTTATCCACGCTTGGTGCTTTAGGTAAAGGTGAATATCGTG
TGTTCAGTGGTTCTGAGTCAAGAAGAGAAACAGAAGCAGTTGCACAACTTCTGGGTAAATCTGCAGGCTTAGTTGTTGTGGATTGC
TCAGCCAGCAGTGAAACGGTTGAGATATTGATGAAGGCAGTTGACTTTGGTTGCTGTGTTGTCCTAGCAAATAAGAAGCCTCTTAC
TTCCACACTGGAACATTATGACAAATTGGTTTTGGATCCTCGACGTATCCGCCATGAATCCACTGTTGGTGCTGGGCTTCCTGTCA
TTGCATCCATGAACCGTATAATTTCATCCGGAGATCCTGTTCATAGCATTGTCGGTAGTTTGAGCGGTACCTTGGGATATGTAATG
AGTGAGCTTGAAGATGGAAGGCCTCTAAGTCTAGTTGTTCGAGCTGCTAAAACACTGGGGTATACTGAACCAGATCCACGTGATGA
CCTTAGTGGCATGGATGTTGCTAGAAAGGGTTTGATTCTTGCTCGGCTTCTTGGGAAGAGGATAATTATGGATAGCATTAAGATAG
AGAGCTTGTACCCTGAAGAGATGAGACCTGGAGTCATGACTGTGGATGATTTCCTCCAAAATGGAATAGCAAAACTTGATCAGAGC
ATTGAGGAGAGAGTTAAAAGAGCTTCATCAAACGGGTGTGTGCTTCGTTATGTTTGTGTGATTGAGGGCTCAAGCGTTCAAGTAGG
CATTAGAGAAGTTCCAAAAGATTCGCCATTGGGACGACTAAGAGGCAGTGACAATATAGTAGAGATACGTAGTCGTTGCTACAAGG
AGCAGCCTTTGGTGATTCAAGGTGCCGGAGCCGGGAACGACACAACTGCAGCCGGTGTTTTTGCAGACATCATCGACATGCAGGAT
CTTTTTCCTTGAGAGAGCATGTGATTTGGTCATCATATCACAGTAATAATAAAACCTTATTTTCAAGGATTGTTTTTATTCATCAT
AAAGAATAGTATTTGCCCTTTGCCTCTCCCTTACATTGCAATAAAAAAGGTTTTTTTTTGTGGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874030 homoserine dehydrogenase family protein [Arabidopsis lyrata subsp. lyrata]16171e-177
NP_001031916 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana]16053e-176
NP_001031917 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana]16019e-176
NP_197605 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana]15793e-173
AAM61538 homoserine dehydrogenase-like protein [Arabidopsis thaliana]15703e-172

Swiss-Prot top hits (Blast detail)Scoree value
P00561 Bifunctional aspartokinase/homoserine dehydrogenase 14643e-045
P27725 Bifunctional aspartokinase/homoserine dehydrogenase 14643e-045
P49079 Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic4643e-045
P49080 Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic4607e-045
P44505 Bifunctional aspartokinase/homoserine dehydrogenase4544e-044

TrEMBL top hits (Blast detail)Scoree value
Q2V358 Homoserine dehydrogenase16016e-176
Q84JZ4 Homoserine dehydrogenase15891e-174
Q8LF92 Homoserine dehydrogenase15802e-173
B9MYR6 Homoserine dehydrogenase13831e-150
B9S6K6 Homoserine dehydrogenase13704e-149

Arabidopsis top hits (Blast detail)Scoree value
AT5G21060.2 homoserine dehydrogenase family protein16051e-178
AT5G21060.3 homoserine dehydrogenase family protein16013e-178
AT5G21060.1 homoserine dehydrogenase family protein15898e-177
AT4G19710.2 bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative4463e-044
AT1G31230.1 AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase4428e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  17%
 
105  42%
 
113  25%
 
122  17%

Unigene MembersMember information