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Information for unigene UN22533
FASTA Sequence |
Unigene ID: UN22533 | Length: 1355 |
| SNP | GGACCCATATGAGCCATAGTTAGCCATAGTCAATACTAGCGAAGCTGAGGAAATCTGAGAAAGAAGGAAGGAAGGAAGGATGAAGA
AGATATCGGTGGTTCTCATGGGCTGTGGAGGCGTTGGCCGACAACTTCTGCAACACATTGTCTCTTTCCGATCCCTACACGCCAAA
ATGGGAGTTCATATACGTGTGATTGGAGTCAGTGACAGTAAATCCTTACTTGTTCCAGTGGATGTGGTCAAAGAGGAACTTGATGA
TGATCTCTTGTCAGTTGTTTGCCGTCTCAAATCTGCTGGTTCTCCGTTATCCACGCTTGGTGCTTTAGGTAAAGGTGAATATCGTG
TGTTCAGTGGTTCTGAGTCAAGAAGAGAAACAGAAGCAGTTGCACAACTTCTGGGTAAATCTGCAGGCTTAGTTGTTGTGGATTGC
TCAGCCAGCAGTGAAACGGTTGAGATATTGATGAAGGCAGTTGACTTTGGTTGCTGTGTTGTCCTAGCAAATAAGAAGCCTCTTAC
TTCCACACTGGAACATTATGACAAATTGGTTTTGGATCCTCGACGTATCCGCCATGAATCCACTGTTGGTGCTGGGCTTCCTGTCA
TTGCATCCATGAACCGTATAATTTCATCCGGAGATCCTGTTCATAGCATTGTCGGTAGTTTGAGCGGTACCTTGGGATATGTAATG
AGTGAGCTTGAAGATGGAAGGCCTCTAAGTCTAGTTGTTCGAGCTGCTAAAACACTGGGGTATACTGAACCAGATCCACGTGATGA
CCTTAGTGGCATGGATGTTGCTAGAAAGGGTTTGATTCTTGCTCGGCTTCTTGGGAAGAGGATAATTATGGATAGCATTAAGATAG
AGAGCTTGTACCCTGAAGAGATGAGACCTGGAGTCATGACTGTGGATGATTTCCTCCAAAATGGAATAGCAAAACTTGATCAGAGC
ATTGAGGAGAGAGTTAAAAGAGCTTCATCAAACGGGTGTGTGCTTCGTTATGTTTGTGTGATTGAGGGCTCAAGCGTTCAAGTAGG
CATTAGAGAAGTTCCAAAAGATTCGCCATTGGGACGACTAAGAGGCAGTGACAATATAGTAGAGATACGTAGTCGTTGCTACAAGG
AGCAGCCTTTGGTGATTCAAGGTGCCGGAGCCGGGAACGACACAACTGCAGCCGGTGTTTTTGCAGACATCATCGACATGCAGGAT
CTTTTTCCTTGAGAGAGCATGTGATTTGGTCATCATATCACAGTAATAATAAAACCTTATTTTCAAGGATTGTTTTTATTCATCAT
AAAGAATAGTATTTGCCCTTTGCCTCTCCCTTACATTGCAATAAAAAAGGTTTTTTTTTGTGGGG
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GenBank top hits (Blast detail) | Score | e value |
XP_002874030 homoserine dehydrogenase family protein [Arabidopsis lyrata subsp. lyrata] | 1617 | 1e-177 |
NP_001031916 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 1605 | 3e-176 |
NP_001031917 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 1601 | 9e-176 |
NP_197605 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 1579 | 3e-173 |
AAM61538 homoserine dehydrogenase-like protein [Arabidopsis thaliana] | 1570 | 3e-172 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P00561 Bifunctional aspartokinase/homoserine dehydrogenase 1 | 464 | 3e-045 |
P27725 Bifunctional aspartokinase/homoserine dehydrogenase 1 | 464 | 3e-045 |
P49079 Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic | 464 | 3e-045 |
P49080 Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic | 460 | 7e-045 |
P44505 Bifunctional aspartokinase/homoserine dehydrogenase | 454 | 4e-044 |
TrEMBL top hits (Blast detail) | Score | e value |
Q2V358 Homoserine dehydrogenase | 1601 | 6e-176 |
Q84JZ4 Homoserine dehydrogenase | 1589 | 1e-174 |
Q8LF92 Homoserine dehydrogenase | 1580 | 2e-173 |
B9MYR6 Homoserine dehydrogenase | 1383 | 1e-150 |
B9S6K6 Homoserine dehydrogenase | 1370 | 4e-149 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G21060.2 homoserine dehydrogenase family protein | 1605 | 1e-178 |
AT5G21060.3 homoserine dehydrogenase family protein | 1601 | 3e-178 |
AT5G21060.1 homoserine dehydrogenase family protein | 1589 | 8e-177 |
AT4G19710.2 bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative | 446 | 3e-044 |
AT1G31230.1 AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase | 442 | 8e-044 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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