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Information for unigene UN22546
| FASTA Sequence |
| Unigene ID: UN22546 | Length: 932 |
| SNP | GCCGAGGTCATAACTCAACCATATTTTACACAGAGGAAATGTCTTGTTCTTCAAAAGCAAGCTACTCATTGGGTTTAAGTTGGAAA
ATGTCAATGTTTACAGATGATAAAATCCAGAATCTGGTGATATATATCATATACATAGTTTTTTTTTCTTCCTTTACAGAACGAAA
TTAGAGCTTCATCTTGTGTTACTTCCGGGGTAGATCTCAACAAAATTGATATCATAGAGCAAAGTTGCATTGCCAGGTATGTTACA
GTCACCAGAAAAGCACCCTGCAGGCTCAGGTCCATAAGCTAACTTAGGTGGAATCTGAAGCTTACGCTTCCCCCCTACTCGCATAG
GAGGTACTCCTTCGCCTCCAAGAATCCCTTGGTCTAGACCCCTTATAACCTTGCCGACACCAATCCGCATAGTAAGTGGTCTTGCA
CGCTTATAGGTACTGTCAAACAACGTTCCGTCTGCAAACCTCGCCGTATAGTGAACATTGACAAGTACGCCACGAGGAGCTTTGTC
ACCGAACCCAACAGCGATATCGCAGAATCCAAGCCCTGATTTTGCGTAGCTGTATTCGCAGAGAGGGTCTCCAACAGTGGCGTAGT
ACTCTATCCTCGTGGCGTCTGCATCCAGAGGCGTCAGAGAGAGAATCGTGGCGGCTAAAATGCCTAAACCCACTCCGAAAACGTTC
TTCTTCGCGGCGGTGAAGCTCCTCTGTTTCTGCTGGCAGTCAATGGGAGAAGAAGAACAGAGACACGAGAATGACGATGAAGAAGA
AGAAGAGATGGTGGGTCTGAAGGAACGTGTATAGATAGATGATGTGAGTGTTAAAGTCGAAATCGCCATTGTTGGATTCGTCAGAG
CTTTCTTCCTTCTCTTCTTCCCTTCCCTGTGGGAAGTGCAAGCGTTTGGTCTTGAATCTTCCAAGAGTACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568067 putative FKBP-type peptidyl-prolyl cis-trans isomerase 4 [Arabidopsis thaliana] | 995 | 9e-106 |
| XP_002868924 hypothetical protein ARALYDRAFT_490753 [Arabidopsis lyrata subsp. lyrata] | 986 | 1e-104 |
| ACU15661 unknown [Glycine max] | 750 | 2e-077 |
| ABK96693 unknown [Populus trichocarpa x Populus deltoides] | 739 | 4e-076 |
| NP_001190971 putative FKBP-type peptidyl-prolyl cis-trans isomerase 4 [Arabidopsis thaliana] | 714 | 4e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCY3 Probable FKBP-type peptidyl-prolyl cis-trans isomerase 4, chloroplastic | 1008 | 1e-108 |
| Q9SCY2 FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic | 381 | 6e-036 |
| Q6CGG3 FK506-binding protein 2 | 203 | 3e-015 |
| P0A0W2 FK506-binding protein | 199 | 8e-015 |
| P56989 FK506-binding protein | 197 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T228 Putative uncharacterized protein | 750 | 2e-077 |
| A9PJZ0 Putative uncharacterized protein | 739 | 3e-076 |
| B7FMD1 Putative uncharacterized protein | 711 | 5e-073 |
| B9H567 Predicted protein | 689 | 2e-070 |
| B9SSL1 Fk506-binding protein, putative | 653 | 3e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39710.1 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative | 1009 | 9e-110 |
| AT5G45680.1 FK506-binding protein 1 (FKBP13) | 381 | 6e-037 |
| AT3G25220.1 FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase | 203 | 3e-016 |
| AT5G48580.1 FKBP15-2; FK506 binding / peptidyl-prolyl cis-trans isomerase | 202 | 3e-016 |
| AT2G43560.1 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | 193 | 4e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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