 |
Information for unigene UN22562
| FASTA Sequence |
| Unigene ID: UN22562 | Length: 1262 |
| SNP | GGATTGAATTCATCTCAGAGGTTGGGAGCAAACCTTAGGTAGTTGAATCTCCAGAGCTTCAATGGCGATTCGGTGGTCAGAGCTAT
GTATCGTACTGTTTGCACTGTCTTACGCCATCTGCGTCATTGCAGCGAAGAGCTACTACGATGTGTTGCAAGTTCCTAAAGGCGCC
TCTGACGAGCAGATCAAGATAGCTTATCGCAAACTCGCTTTGAAGTATCATCCTGATAAGAATCAAGGCAACGATGAAGCTACTCG
CAAGTTCGCGGACATCAACAACGCTTATGAAGTGCTATCGGATGAGGAGAAGAGGGAGATTTATAACAAGTATGGTGAAGAAGGGC
TTAAGCAGCATGCTGCTAATGGAGGACGTGGAGGTGGTGGTGGGGGCATGAATATGCAGGACATCTTTAGCCAGTTTTTTGGTGGT
GGTGGTTCGAGGGAGGAAGAAGAGAAGGTCGTCAAGGGTGATGACGTGATTGTGGAACTTGAGGCCACTCTTGAAGATTTGTACAT
GGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAAGTGCAACTGCAGGAATGAGGTTT
ATCACCGACAGGTTGGTCCTGGAATGTTCCAACAGATGACAGAGCAGGTCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAA
GGATACTTTGTCACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTACGAAGATGGCGAACCTATTCTTGA
CGGTGATCCTGGTGACCTTAAGTTTCGAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTACACATGACCG
TCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAAGTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAG
GGAATTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTTCACTACAGCACAAAGAAAGGCAACCTCTTTGT
CACTTTTGAGGTTTTGTTTCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGGCTTAGTACTCTCTCTTTA
GAATTTTGTTGTTTAAATAGAACTTGTAATGATCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGATCTA
ATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATATGATTTACGCAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878466 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 1740 | 6e-192 |
| NP_191819 DNAJ heat shock family protein [Arabidopsis thaliana] | 1737 | 1e-191 |
| XP_002275221 PREDICTED: hypothetical protein [Vitis vinifera] | 1473 | 5e-161 |
| XP_002515306 Chaperone protein dnaJ, putative [Ricinus communis] | 1464 | 6e-160 |
| XP_002320981 predicted protein [Populus trichocarpa] | 1460 | 2e-159 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6TUG0 DnaJ homolog subfamily B member 11 | 795 | 1e-083 |
| Q99KV1 DnaJ homolog subfamily B member 11 | 789 | 5e-083 |
| Q9UBS4 DnaJ homolog subfamily B member 11 | 788 | 6e-083 |
| Q5RAJ6 DnaJ homolog subfamily B member 11 | 788 | 6e-083 |
| P81999 DnaJ homolog subfamily B member 11 | 780 | 5e-082 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LZK5 AT3g62600/F26K9_30 | 1737 | 9e-192 |
| A5BIW0 Putative uncharacterized protein | 1473 | 4e-161 |
| B9RNG7 Chaperone protein dnaJ, putative | 1464 | 4e-160 |
| A9PFY3 Predicted protein | 1460 | 1e-159 |
| B9GSG6 Predicted protein | 1443 | 1e-157 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G62600.1 ATERDJ3B; heat shock protein binding / unfolded protein binding | 1738 | 4e-194 |
| AT3G08910.1 DNAJ heat shock protein, putative | 267 | 1e-023 |
| AT1G10350.1 DNAJ heat shock protein, putative | 249 | 2e-021 |
| AT5G25530.1 DNAJ heat shock protein, putative | 249 | 2e-021 |
| AT5G01390.1 DNAJ heat shock protein, putative | 246 | 4e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
