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Information for unigene UN22572
| FASTA Sequence |
| Unigene ID: UN22572 | Length: 1622 |
SSR | | GGAAGATACAATACAACCTGTTGTGTCCATTTAAAAATATTTAATTTGAAATATTTTCGTTTCCTCATTGTTCAACGCAGAAGGAA
GGAGAGTAACCATGCTCATCTGAGAAAAAAGAAGATGAAGTCAGACAAGCTCTAAAGCCTGTAATGGAAGACAAGAAAGCAAACAT
AATCGCAACCATATCCATCTTATCCCTTATCATAGTAATAACCGTCGCCAGAGTTTCTCTAAAACTCTCCAAAACGTTTTACCTCA
TCGCCGGCGTCGACATCTCCTTGATCCTCGCCGTGATCTGTTTCCTCATAATCCGTCGCCGTTACAACAGAGAGAGAAAGATCTTG
GTATCAAAGTACGTCTCGGAAGGCAGAGAGCTCCGGATCGAGTACAGTTTCCTCCGGAAAGTCGCCGGAGTACCGACCAAGTTCAA
GCTCGAGGATCTCGAAGAAGCCACCGACGGGTTCCGGATCCAGATCGGAAAAGGCGGGTCGGGCTCGGTCTTCAGAGGAGTTCTCA
AAGACGGGAGCCAAGTGGCTGTGAAGAGAGTCGAAGGGGAAGAGAAAGGAGAAAGAGAGTTTAGGTCGGAAGTAGCTGCTATAGCT
TCCGTGCAGCACAAGAATCTAGTCCGTCTCTACGGTTACTCGTCAGTGAATCGCCAGAGGTTCCTCGTCTACGCGTATGTACTTAA
CTCGTCTCTAGATCACTGGATCTTCCCGGACAGAGGAGGGAACAGGAGGGCCAGAGGATGCTTGACGTGGGACCAAAGGTACCAAG
TCGCTGTCGATGTAGCGAAAGCCCTAGCTTATCTTCACCACGACTGTCGGTCAAAGATCTTGCATCTCGACGTGAAGCCAGAGAAC
ATTCTCCTCGACGAGGATTACAGAGCCGTGGTGACAGACTTCGGACTCTCGAAGCTGATTGCTAGAGACGTGAGCAGAGTTGTGAC
GGAGATTCGCGGCACGTGCGGATACCTAGCACCAGAGTGGCTTCTTGAACACGGTATCTCTGAGAAGTCTGATGTCTACAGCTACG
GAATCGTGTTGCTAGAGATGATCGGAGGGAGGAGGAGTATAATGAAGGTAGAGGTCGAGGAAACGAACAAAAAGACGAACAAGAAG
AGCAAGAAGAAGAAGTTAGAGTATTTTCCGAGGATTGTGAACCAGAGGATGAGAGAAAGGAAGGTAATGGAGATCGTAGATCAGCG
GCTGGAGTTAGGAGATGAAGGGCAAGTGATGAAGCTGGTGTGTGTGGCTCTTTGGTGTATACAGGAGAAGGCAAAGAATAGGCCTG
ATATGGCTATGGTGATTGAGATGCTTGAAGGGAGAGTTCCGGTGAGTGAGCCTCCGGATTCACAGCTTGTTGTGGTCGATCTTTTG
GCAGCTGGTGATGATGATGATGATGGTGCACCTACAGGTGTACGACGTGTTGTAGAGGTACCGAGGTTGCATATTCAGAGGGAAAG
GAATTTTCGTTTACCGTCTATTTGTTCTAGCATCATATCTCCCATTTCTCCACGGTAGAGTTTTGGTTTTGTTCATTTGGTATATG
TAATAACAGACAGTTTAATTATTACCAGGATTGAACACAACATTATGGTTTTAACTGGAAGCTATCTCGCTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197505 putative receptor-like protein kinase [Arabidopsis thaliana] | 1872 | 4e-207 |
| XP_002871918 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1870 | 7e-207 |
| AAM63226 receptor-like protein kinase-like protein [Arabidopsis thaliana] | 1862 | 6e-206 |
| XP_002281820 PREDICTED: hypothetical protein [Vitis vinifera] | 1383 | 2e-150 |
| XP_002524443 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] | 1332 | 2e-144 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94C25 Probable receptor-like protein kinase At5g20050 | 1872 | 2e-208 |
| Q0WVM4 Probable LRR receptor-like serine/threonine-protein kinase At2g23950 | 520 | 1e-051 |
| O04086 Probable receptor-like protein kinase At1g11050 | 497 | 5e-049 |
| Q9S9M5 Wall-associated receptor kinase-like 1 | 475 | 2e-046 |
| Q9ZRF9 Probable LRR receptor-like serine/threonine-protein kinase RPK1 | 471 | 5e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SEM4 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative | 1332 | 1e-144 |
| Q5VSC0 Os06g0142650 protein | 1031 | 9e-110 |
| A2Y951 Putative uncharacterized protein | 1027 | 3e-109 |
| A3B8A6 Putative uncharacterized protein | 1022 | 1e-108 |
| C5Z3U5 Putative uncharacterized protein Sb10g002930 | 954 | 8e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20050.1 protein kinase family protein | 1876 | 5e-210 |
| AT4G32300.1 SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | 783 | 3e-083 |
| AT4G00340.1 RLK4 (RECEPTOR-LIKE PROTEIN KINASE 4); protein kinase/ sugar binding | 664 | 2e-069 |
| AT5G35370.1 ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | 643 | 5e-067 |
| AT2G19130.1 S-locus lectin protein kinase family protein | 563 | 9e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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