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Information for unigene UN22590
| FASTA Sequence |
| Unigene ID: UN22590 | Length: 1100 |
SSR | | GGGTTGAGAGTTGAGATAGGAAGAGGAGAAGGAAAGCTGCAACACTTCAAATCTTCTAGAGCGAGCGACGATGATGAATGGCAACT
GTTTATTCTCAGCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTTGTCACTTCCCTCATCGCTCTATACCGAGTGTTATTCCTTCT
GTTTATCGCAGAACCGGAGTCTCCGATGACGTCGCCGTCGAGTGTCGGAATCTCTGTTTCTCCGCCACTACAAGACCGGGGATCTC
TGTTCCTATTCTCCGTGATTGCTCCTTTCGGATTCCTTCTGGACAGTTATGGATGCTTCTTGGTCCCAATGGCTGTGGCAAATCTA
CCCTTCTCAAGATTTTAGCTGGTGTAGTGAATCCAACCAGCGGCAATATTTTTGTGGAAAGTCCCAAGAATTTTGTGTTTCAGAAT
CCTGATCATCAGGTAGTGATGCCTACTGTGGAAGCTGATGTAGCGTTTGGTCTTGGCAAGTATCCTGACATTAGTCTAGAAGAAGT
CAAGTTTAGGGTGATTACTGCTTTGGATGCTGTTGGTATGCGTGATTACATGCAGAGACCGATTCAAACGCTCAGTGGTGGTCAGA
AACAAAGAGTGGCCATTGCTGGTGCTTTAGCTGAAGTTTGCAAAGTGCTGCTGTTGGATGAGCTCACTACCTTCCTAGATGAGTCT
GACCAGTTGGGTGTGATCAAAGCTGTGAAAGAGTTAATAAATGCAAAGAAAGGAGGAGACGTGACTGCGTTGTGGGTGACACATCG
GTTAGAGGAGCTGGAGTATGCGGATGGAGCTGTGTATATGGAGAATGGGGAGAGTGGTCAGGCATGGTGATGCAGCCACCGTACTA
GATTTCATTAAGGCCAAACAATCCTCTTACATTGATCAAATCGGTTTTTAATTGTCACCGATTTGCCACTCTCAATGTTTCCAGAG
ACTGGTTCAAACTCTCAGTTGTAGCATATATAGAGGTTTGTAGAGGCAATGAAAGCTGGAGATTTACTAAGCTTTTGTAAAAGACT
GTGATGTACTTCTGCAGACGGTATAAGCTTATTTTAATCAACAGAGCAAAGTTGATCAGTGAACACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195072 ABC transporter I family member 10 [Arabidopsis thaliana] | 1000 | 3e-106 |
| XP_002867180 ATNAP13 [Arabidopsis lyrata subsp. lyrata] | 988 | 8e-105 |
| XP_002280615 PREDICTED: hypothetical protein [Vitis vinifera] | 818 | 4e-085 |
| CBI37536 unnamed protein product [Vitis vinifera] | 818 | 4e-085 |
| XP_002306244 predicted protein [Populus trichocarpa] | 807 | 8e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H1R4 ABC transporter I family member 10, chloroplastic | 1000 | 1e-107 |
| Q1J982 Cobalt import ATP-binding protein CbiO 1 | 272 | 4e-023 |
| Q1JJC9 Cobalt import ATP-binding protein CbiO 1 | 272 | 4e-023 |
| Q1JEC8 Cobalt import ATP-binding protein CbiO 1 | 272 | 4e-023 |
| Q1J449 Cobalt import ATP-binding protein CbiO 1 | 272 | 4e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H482 Predicted protein (Fragment) | 807 | 5e-084 |
| B9SZA6 Metal abc transporter, putative | 768 | 2e-079 |
| B8AA53 Putative uncharacterized protein | 754 | 7e-078 |
| B9ET82 Putative uncharacterized protein | 754 | 7e-078 |
| Q5ZD09 Os01g0770500 protein | 754 | 7e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G33460.1 ATNAP13; transporter | 1000 | 1e-108 |
| AT1G28010.1 PGP14 (P-GLYCOPROTEIN 14); ATPase, coupled to transmembrane movement of substances | 134 | 3e-008 |
| AT1G02520.1 PGP11 (P-GLYCOPROTEIN 11); ATPase, coupled to transmembrane movement of substances | 134 | 3e-008 |
| AT1G02530.1 PGP12 (P-GLYCOPROTEIN 12); ATPase, coupled to transmembrane movement of substances | 132 | 5e-008 |
| AT2G36910.1 ABCB1 (ATP BINDING CASSETTE SUBFAMILY B1); ATPase, coupled to transmembrane movement of substances / auxin efflux transmembrane transporter/ calmodulin binding | 132 | 5e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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