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Information for unigene UN22619
| FASTA Sequence |
| Unigene ID: UN22619 | Length: 1270 |
SSR | | GATACGTATTGTGTCAAAGCTCAAGTCGAGATGGCTTTAGGAAGGTTTGAAAATGCAGTTATGGCTGCTGATAAAGCTAGCCAAAT
AGATCCACGAAGCAACGACGTCGCCACGTTACAGAATACTGTTACATTGGTTGCTAGGGCTCGTGTTCGTGGTAACGATCTGTACA
AATCAGAAAGATACACGGAAGCAAGCTCAGCTTATGCAGAAGGCCTTAGGCTTGATCCGTGCAACGCTATTCTGTATTGTAACCGA
GCGGCTTGTTGGTTCAAACTTCGAATGTGGGAACGCTCTATCGAAGATTGTAACCAAGCGCTGCGTTTTCAACCACGTTACACAAA
GCCACTTCTCCGTAGAGCTGCCTCATATATCAAGATGGAGAGATGGGCGGCTGCGGTGAGTGATTACGAAGCCTTGAGGAAGGAAC
TGCCTCATGATAAGGAAGTTGCTGAATCTTTGTTTCACGCTCAAGTCGCGTTGAAGAAGTCTCGCGGAGAAGAAGTTTTGAATATG
GAGTTTGGTGGTGAAGTTGAGGAAGTTTACAGCCGTGAACAGTTTAAAGCTGCCATGAATCTACCGGGAGTTTCGGTTATTCATTT
CTCGACGGCCTCTGATCATCAGTGCAAGCAGTTGTCTCCGTTTGTGGATTCGCTATGTACTCGTTATCCTTCTATACACTTCCTCA
AGGTGGACATAGATAAATGTCCGTCTATAGGTAACGCAGAGAACGTGAGGGTTGTGCCGACAGTGAAGATATACAAGAACGGTACT
CGTGTAAAGGAGATTGTCTGTCCAAGCAAAGAAGTGTTGGAGTACTCAGTGAGACACTATAGCAGTTAGTTAATACACTCATTTTA
CCCTCAATAATCCCACTTAAGTTCATTACCAGGGAACATCATTAGTGTAGAGTTATCAGCTCTTTATGATTTGTTCATTCATTCCC
TTCCTCTTCATTGCCCTGTGATCTGTCTCTCTGTCTGTGTTCTTCTTCTTCTTCCATTCATTTTTCTCTGCAGATTGAGATTGGCA
TAGGCTCCTTCTTCAGCTTCACTTGTTTAGGTATATTGAGAGATGTTTACTGGTTGGAGATTACTCTGTGTACATAAGAGAAGTCT
GTATGTGAGTGAAGAAGGGGTTTTATTTACTAAAATGGGCAAACAGAGGATGATTTGGATTCTTCATTTTTTCCCCTTTGTTACTC
TTAGAGCTTAGTGAAACTTGTCATTTCATTTCTACTCTTTTTCACAACATTTTCATCAATAAAAAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891741 hypothetical protein ARALYDRAFT_892363 [Arabidopsis lyrata subsp. lyrata] | 1348 | 2e-146 |
| NP_175737 TPR repeat-containing thioredoxin TTL1 [Arabidopsis thaliana] | 1338 | 2e-145 |
| XP_002524280 Small glutamine-rich tetratricopeptide repeat-containing protein A, putative [Ricinus communis] | 1092 | 8e-117 |
| ACU18444 unknown [Glycine max] | 1073 | 1e-114 |
| XP_002283097 PREDICTED: hypothetical protein [Vitis vinifera] | 1028 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9MAH1 TPR repeat-containing thioredoxin TTL1 | 1338 | 1e-146 |
| Q54IP0 DnaJ homolog subfamily C member 7 homolog | 189 | 2e-013 |
| Q43468 Heat shock protein STI | 177 | 4e-012 |
| P53041 Serine/threonine-protein phosphatase 5 | 176 | 6e-012 |
| P53042 Serine/threonine-protein phosphatase 5 | 176 | 6e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SE65 Small glutamine-rich tetratricopeptide repeat-containing protein A, putative | 1092 | 6e-117 |
| C6T9E2 Putative uncharacterized protein | 1073 | 9e-115 |
| B9I1V3 Predicted protein | 1058 | 5e-113 |
| Q9LKB0 Emb|CAB68200.1 | 1025 | 3e-109 |
| B4F8Q0 Putative uncharacterized protein | 950 | 2e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G53300.1 TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1); binding | 1339 | 7e-148 |
| AT3G58620.1 TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4); binding | 823 | 5e-088 |
| AT2G42580.1 TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding | 808 | 3e-086 |
| AT3G14950.1 TTL2 (Tetratricopetide-repeat Thioredoxin-Like 2); binding | 688 | 2e-072 |
| AT1G78120.1 tetratricopeptide repeat (TPR)-containing protein | 377 | 3e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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