Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22624

FASTA Sequence
Unigene ID:UN22624 Length: 1453
AGGGACACACAAGACAACCAAAACACGAGAAGATTTTATTCGATTTTATCTGTCATTTGCGTCAACTGTTACTATCGCGACCAATC
TCGGTGTTCGTAGCCATGAGTCTTCTTACAGATCTCATTAACCTTAACCTCTCGGAGACCACTGACAAAATCATTGCGGAATACAT
ATGGGTTGGAGGTTCTGGAATGGATATGAGAAGCAAAGCCAGGACTCTTCCTGGACCAGTGAGTGACCCTTCGGAGCTACCAAAGT
GGAACTATGATGGTTCAAGCACAGGCCAAGCTCCTGGTGAAGATAGTGAAGTCATCTTATACCCACAAGCGATATTCAAAGATCCT
TTCCGTAGAGGCAATAACATTCTTGTCATGTGCGACGCTTACACTCCAGCGGGTGAACCAATCCCAACAAACAAAAGACACGCTGC
GGCTAAGGTCTTTAGCCAGCCTGATGTGGTAGCTGAAGTGCCATGGTATGGTATTGAGCAAGAGTATACTTTACTTCAGAAAGATG
TGAAGTGGCCTGTTGGTTGGCCTATTGGCGGCTTCCCCGGTCCTCAGGGACCATACTATTGTGGTGTTGGAGCAGATAAATCTTTT
GGCAGAGACGTTGTTGATGCTCACTACAAGGCCTGCTTATACGCTGGTATCAACATTAGTGGCATCAATGGAGAAGTCATGCCGGG
TCAGTGGGAGTTCCAAGTTGGTCCAGCTGTTGGTATTTCGGCCGGTGATGAAATATGGGTCGCACGTTATATTTTGGAGAGGATCA
CGGAGATTGCTGGCGTGGTGGTATCTTTTGACCCAAAACCGATTCCAGGTGACTGGAATGGTGCTGGTGCTCACTGCAACTATAGT
ACCAAGTCAATGAGGGAAGATGGTGGTTACGAGATTATCAAGAAGGCTATCGATAAACTGGGACTGAGACACAAAGAACACATTGC
TGCTTACGGTGAAGGCAATGAGCGCCGTCTCACGGGTCACCACGAGACTGCTGACATCAACACTTTCCTCTGGGGTGTTGCGAACC
GTGGAGCATCAATCCGTGTAGGACGTGACACAGAGAAAGAAGGGAAAGGATACTTTGAGGATAGGAGGCCGGCTTCGAACATGGAT
CCTTACATCGTGACTTCCATGATTGCAGAGACCACAATCCTCTGGAACCCTTGATCAGATCGAAGAAGATTGTTGAATTTTCACTC
CATTTGGGTTTCTTGCATGATTCAACGTTTGTATGTTTCTCTATCAAGCATTGTCTCAGAACAAGTCGAGAGATTTGCTCTGTTCT
TATGGCTTTTATTGTTTCACATCCATTGAAAACATCTCTCTGTATCATTTTATGAGTAAAGTTTGGTTTGGTTCTTTGGGTTTTTC
GTTTGGTTTAGATAGTAAAATCAGAACTGGTTTTTGTTTAGTTTAGTATGTAGATAAAAATACAAATGTCAAAAAGA

Annotation(GO term)
GenBank top hits (Blast detail) ScoreE value
BAA04996 glutamine synthetase [Raphanus sativus]19111e-211
CAA58118 glutamate--ammonia ligase [Brassica napus]18983e-210
NP_198576 glutamine synthetase cytosolic isozyme 1-1 [Arabidopsis thaliana]18832e-208
XP_002870545 ATGSR1 [Arabidopsis lyrata subsp. lyrata]18813e-208
1804333B Gln synthetase18473e-204

Swiss-Prot top hits (Blast detail) ScoreE value
Q56WN1 Glutamine synthetase cytosolic isozyme 1-118838e-210
Q42899 Glutamine synthetase cytosolic isozyme18391e-204
Q8LCE1 Glutamine synthetase cytosolic isozyme 1-218165e-202
P04078 Glutamine synthetase cytosolic isozyme18013e-200
P32289 Glutamine synthetase nodule isozyme17994e-200

TrEMBL top hits (Blast detail) ScoreE value
O24335 Glutamine synthetase19117e-212
Q42623 Glutamine synthetase18982e-210
O04853 Glutamine synthetase (Fragment)18444e-204
B5A7Q7 Glutamine synthetase18427e-204
O04852 Glutamine synthetase18427e-204

Arabidopsis top hits (Blast detail) ScoreE value
AT5G37600.1 ATGSR1; copper ion binding / glutamate-ammonia ligase18845e-211
AT1G66200.1 ATGSR2; copper ion binding / glutamate-ammonia ligase18173e-203
AT5G16570.1 GLN1;4; glutamate-ammonia ligase17663e-197
AT3G17820.1 ATGSKB6; copper ion binding / glutamate-ammonia ligase17251e-192
AT1G48470.1 GLN1;5 (glutamine synthetase 1;5); glutamate-ammonia ligase16014e-178


EST library breakdown for ESTs in the assembly
 
11 12    57%
 
9 3    14%
 
8 2    10%
 
7 1    5%
 
2 1    5%
 
18 1    5%
 
6 1    5%

Unigene Members
Unigene image