Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22632

FASTA Sequence
Unigene ID: UN22632Length: 959 SSRSNP
GGATCCCTCTCTCTCTCTCCGCCACTCTACAATGGCCGGTCTACTCAAAACGCTGGCGGTGAGGAGGAAGAAGCGGCGGTTACCAT
AGCATTGCTGAGTTCATACAAAGAAGCTTTAGCAGAGAACAACGAGGAGAAGATTGCTGAGATAGAAGCGTCACTGAAGTCCATCG
AAGATGAAAAGTTTCATCTCCAGGAGAAAGCCGTCTCTTTATCTAATGAGTTAACTGTAGAGAGGGATCGGCTGATAAGGATCAGT
GCGGACTTCGACAACTTCAGGAAGAGGAATGAGAGGGAGAGGCTGAACCTTGTTTCAAATGCTCAAGGGGAGGTTGTTGAGAATCT
TCTGGCGGTTTTGGATAATTTCGAGAGAGCCAAGTCCCAGATCAAGGTGGAGACTGAGGGAGAAGAGAAAGTCACCAACAGCTACC
AGAGCATATACAAACAGTTTGTTGAGATTCTAGGTTCGCTTGGTGTTGTCACTGTGGAGACTGTCGGCAAACAGTTTGATCCAATG
CTTCACGAGGCAATAATGAGGGAGGATTCTGCGGAATACGAAGAGGGTATAGTACTTGAAGAATACAGGAAAGGTTTCTTGCTAGG
GGAAAGACTTTTACGTCCTTCAATGGTGAAAGTATCAGCTGGACCCGGACCAGAAAAGGCAGGTGAAACCGAAGGAGAAGTAGCCG
TTGCACAAGGAAGCGCAGAAGGAGCAGAAGCAGAAGCGTCTTCTTCATCTTGAATGAACAGACAATCAAGACTAAGCAGTTTTGTG
GTGTGCGTAAGAGAGAGAGAGAGAGAGAGTGAGAGAAGGGTCTGGTTAAGATTTAATTATTGGCATTGTTGTTGTTGTTACACTAA
ATTACTTCTACAGAGTTTAGCGAAAATAGAATGAGATTTTCTATCGAGATTGTTTTTTATTTCTTTTTAATTTAATACTGGAAGAT
AATTGATTTTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850840 molecular chaperone GrpE [Arabidopsis thaliana]9582e-101
NP_568356 molecular chaperone GrpE [Arabidopsis thaliana]9582e-101
XP_002873846 EMB1241 [Arabidopsis lyrata subsp. lyrata]9359e-099
XP_002319738 predicted protein [Populus trichocarpa]7753e-080
XP_002530954 Protein grpE, putative [Ricinus communis]7735e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q8DJB3 Protein grpE3763e-035
A2C5L7 Protein grpE3727e-035
A2BNE2 Protein grpE3711e-034
A9B9L4 Protein grpE3655e-034
Q7V9C9 Protein grpE3646e-034

TrEMBL top hits (Blast detail)Scoree value
Q94K56 GrpE protein homolog9581e-101
Q9XQC7 GrpE protein homolog9581e-101
B9I664 GrpE protein homolog7752e-080
B9SY85 GrpE protein homolog7734e-080
B6TXQ6 GrpE protein homolog7214e-074

Arabidopsis top hits (Blast detail)Scoree value
AT5G17710.1 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization9587e-104
AT5G17710.2 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization9587e-104
AT1G36390.1 co-chaperone grpE family protein4936e-050
AT1G36390.2 co-chaperone grpE family protein4936e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  25%
 
104  50%
 
72  25%

Unigene MembersMember information