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Information for unigene UN22675
| FASTA Sequence |
| Unigene ID:UN22675 |
Length: 977 |
GGGTGAGCACTATCCTGATCGAGAAACCCAAAACGAGTGGTGGAATCGTTCCCGACTACTCACAGAGAAACCATCTCCACAAGCAA
CCTGCACACAAAAAAGAATCTCTCAAAACACTTCTTCTCCACTAATACAATACTAATTACTTCTGATCAACAACATTGTTGCTGCG
ATTCAAGCCATGGCTTCACTTTCAGTCTCTTCTTCCTCGACAATCATCGACTCAAGAGCTCCTCCTCTTCCTTCTCGACAAGCATC
TTCTCCTTCGTGTATTTCCCTTCCGACACTTCCTCCTCAGCCGCTTCAGTCTCAGACCCGCGCCGCCAAAGCCACTGCTTACTGTC
GGAAGATAGTGAGGAACGTTTTGACACGAGCTGCCGATGTTGAAGTTGTTGCCACTACCCAAGTCGAAGCTCCTGCCGCCAATACC
GAAGCTGCGAGTACAGAGTTACCGGATATCGTCAAGACCGTTCAAGAAGCTTGGGACAAAGTAGAGGATAAGTATGCAGTTAGTTC
TCTCGCAGTTTCTGGTTTTGTGGCTCTTTGGGGAACTGCTGGTGTGATCTCGGCTATCGACAGGCTTCCATTAGTTCCTGGTGTTC
TTGAAGTTGTTGGCATTGGTTACACTGGGTGGTTTGCTTACAAGAACCTGATATTCAAGCCAGACAGGGAGACTCTGTTTCAGAAA
GTGAAGGACACATACAGAGACATAATAGGGAGCAACTGAACCAGATGATGATGAAGAAGAAGCCTTTTAGGGTGGGCAATTCATAA
ATTGAATGAATCTAACACATCCCACATCCTTCATTCAATCTCCCTTCTCGTAACTAAATAAATTATACATCCTCTTTGTCTCAGGT
GTCTTTTTAGCTCAAAATATATCATCCATACATCCATCTGTGTCGATGTTGTAAATTCCTCAGACTATATATATGAGATGTTTGGT
ACATTTTTACAGAGGTTTCATACTTTTGCCC |
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| GenBank top hits (Blast detail) |
Score | E value |
|---|
| XP_002880267 hypothetical protein ARALYDRAFT_483848 [Arabidopsis lyrata subsp. lyrata] | 680 | 3e-069 | | NP_566086 thylakoid membrane phosphoprotein [Arabidopsis thaliana] | 647 | 2e-065 | | AAM63765 unknown [Arabidopsis thaliana] | 636 | 4e-064 | | ABD32715 thylakoid membrane phosphoprotein 14 kda, chloroplast precursor, putative [Medicago truncatula] | 534 | 3e-052 | | ACU14969 unknown [Glycine max] | 444 | 8e-042 |
| Swiss-Prot top hits (Blast detail) |
Score | E value |
|---|
| Q8LCA1 Thylakoid membrane phosphoprotein 14 kDa, chloroplastic | 676 | 4e-070 | | O04616 Uncharacterized protein At4g01150, chloroplastic | 203 | 3e-015 |
| TrEMBL top hits (Blast detail) |
Score | E value |
|---|
| Q2HTB6 Putative uncharacterized protein | 534 | 2e-052 | | C6T0E6 Putative uncharacterized protein | 444 | 5e-042 | | A9PFP7 Putative uncharacterized protein | 438 | 3e-041 | | B9I954 Predicted protein | 438 | 3e-041 | | A5C9J2 Putative uncharacterized protein | 429 | 3e-040 |
| Arabidopsis top hits (Blast detail) |
Score | E value |
|---|
| AT2G46820.1 PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding | 677 | 3e-071 | | AT2G46820.2 PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding | 677 | 3e-071 | | AT1G52220.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding (TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 231 | 2e-019 | | AT1G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding (TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 219 | 4e-018 | | AT4G01150.1 unknown protein | 204 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Unigene Members |
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