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Information for unigene UN22678

FASTA Sequence
Unigene ID: UN22678Length: 1020  SNP
GACCAAAAAAAATCTTCCTTTCAAATTGATACTATACATAATGTTTATCACAATCCACATTTGGAGTACAACATTCTGCAAAACAT
TGATAAATTGAAAAAGTAACAGCCTTCACAATATTTAACATCATAGTCCACTGAAGTTGAAAGAGGTCATGAAACCTAAAACAAAG
AAACAACCTATATCACCTAAAAACAAAACCAAATGTCAAACAAAGGAGTGTGCTTCCATTTTATTATCCACCCTACTCTTTTACAT
GGATTTTTTGAAAAATGAAATAAAATCAAACTCATAAGGTTCAATCACTTCATAAGGTATTGTCAAACCCCAACTAGTGTTTCGAT
CTCAAAACATACACTTCACAACATATTTAATGTTGTGATTTATGAACTTTCGTTCTTGAGCTCACCACAATCTTCAATCACAACTG
GCTCAGAGGTATTCCCCCTCTCAGACCCGACCTTCTCCATTTCCTCCACCATATTGTACCCATCAACAACCTTCCCAAACACCACG
TGTTTCCCATCAAGCCACGGCGTCTTCGCGGTGCAGATAAAGAACTGAGAACCATTCGTGTTGGGACCCGAATTAGCCATGGACAA
AATCCCCGGACCAGTGTGCTTCAGCTTGAAGTTCTCGTCCTGAAACTTAGACCCGTAGATAGATTCTCCACCGGTTCCATTCCCAC
GGGTGAAATCACCACCTTGGCACATGAACCCCGGGATGATACGGTGAAAGGCAGAGCCTTTGTAGTGCAACGCCTTCCCTGCTGCC
CCGAGACCCTTCTCTCCTGTGCAGAGAGCACGGAAGTTTTCAGCGGTTTTCGGCGTCACGTCAGCGAAGAGCTCCATCACAACACG
ACCCGCTTTGCTCTTTCCTACCAAGATGTCAAAGAAGACCTTCGGGTTTGGCATTTTTCCTGTCATCTCTTCACTCCAAATCCTTT
TTGCAGATTGAAAGTCTTGTCTTCTCGAACGAGAGTCTGTAGATTTTTTGTCCTTCGATCATGTGAGTGTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878060 hypothetical protein ARALYDRAFT_907041 [Arabidopsis lyrata subsp. lyrata]8462e-088
NP_191166 Peptidyl-prolyl cis-trans isomerase CYP19-3 [Arabidopsis thaliana]8401e-087
AAA74096 cyclophilin [Arabidopsis thaliana]8363e-087
AAB96833 cytosolic cyclophilin [Arabidopsis thaliana]8354e-087
ACG70968 cyclophilin [Ziziphus jujuba]8255e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q38867 Peptidyl-prolyl cis-trans isomerase CYP19-38404e-089
Q8W171 Peptidyl-prolyl cis-trans isomerase 17357e-077
Q39613 Peptidyl-prolyl cis-trans isomerase7357e-077
P21568 Peptidyl-prolyl cis-trans isomerase7267e-076
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-17232e-075

TrEMBL top hits (Blast detail)Scoree value
B5LWR0 Peptidyl-prolyl cis-trans isomerase8254e-086
B9S7J2 Peptidyl-prolyl cis-trans isomerase8093e-084
A5B709 Peptidyl-prolyl cis-trans isomerase7994e-083
A9PA45 Peptidyl-prolyl cis-trans isomerase7977e-083
C6SYQ9 Peptidyl-prolyl cis-trans isomerase7969e-083

Arabidopsis top hits (Blast detail)Scoree value
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase8413e-090
AT3G56070.2 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase8413e-090
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase7231e-076
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase7088e-075
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase6934e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  24%
 
1210  48%
 
81  5%
 
115  24%

Unigene MembersMember information