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Information for unigene UN22711
| FASTA Sequence |
| Unigene ID: UN22711 | Length: 1973 |
SSR | | GGGGGACCACATCTTCTGTACATTAAACTAAGAAAATGACAACATTTTCTTCTTCTTCTTCCTCTTGTAATTATGAAGAAGAACTA
TTGAAGAGAATTGCATAGATACAATCTTCTCTTTGTGAATATTTATATATTTTAAAAACTTTCTGCAACTAATCTCTCATTCAACA
AGTTCTTAGTTCTTACTAGAAGACATGGGTGAAGAAGCAGCGATCGATCGGTTACCTTTACACCTTCTTGCTTATATATTTTCTCT
GGTTACCTCTTTCACCGAATTGGCCCAGGCAAGTGGGGTTTGTAAGAAATGGAGAAAGGCTGTGAACCAATCAATGGCGAGAAGAG
AGTCTCTGAGCTTTGCTGGTTGGAAAATGGACGATGCTTCCACTTCTCGCCTTGTACATCTTGCTTACAATCTCAGAGAACTCGAC
ATATCTAGAAGCAGATGGGGTTGTCATGTAACTGATAATGGTCTTTACCAAATAGCTTCCGCTAGATGTGTAGCCAATTTAACCTC
AATCTCTTTATGGGGCATGACCGCCATTACTGATTCTGGCGTTGTTCAACTGGTATCAAGAACGTCTTCCTTGCAGCATCTGAACA
TTGGAGGAACATTCATCACCGACGAGTCCCTTTTCGCCATTGCGGAACGCTGCCATCATCTCAAGACAATCAGCATGTGGTGTTGC
CGCCATGTGACAGAGAGAGGCCTTCTTGTTCTTGTCAACAAATGCAGAAAACTAGAATCTCTCAACTTGTGGGGAACTAGAGTTCC
TGTGGATTGCTTCATTGCTTTGCTTACCATCAGTCCTGCACTTCAGATCAAACCCATTCAACTCCTCCTCAATGCTCAGAATCCAC
CACCTTTGTTGCATGCTCTCTAGTCTTTTGTTGCTTTGTATATAGTAATTCATAAAACTGGAATCTCCATTTCTCTTATGTGTTCT
CTCTCTCTCATCAATAAAAATATTATATAAATTATTCAGTAAAGATTCTATATATTTATATATAAGTTACATAAAGATTCAAACGG
AAGCTGAAAGACAACACATACACACACGCTTTCTGACTATAAAATCTGCAGTCTACAAATAACAAGAATCAAAATCAGAAAACTCT
TTTCTTTCTAACGCATTTCATATATATATATCCTCATTCATCTCTAGAAGTGGAATAGTTGTTGGTTGTGTCATAGCAAAAACACT
ATCAATGGAAGCCATGAAAAGCACAAGGCAAGAATGGTGTTTGGTGAATAGGCAACAGCAGCTAAGGATCTTGAAAACTGAACTGA
ACCTGAGTAGGTCCCAGCCGTTGATTCCATGTCTGGTGCTCTTGTCTGAAGAGTAACGTTTTTGCACGAACCAAAAGCTGCTTCTG
GCTGGCAGGCAGCAAGGGTTTCACAACCGCAAATAACAGGTCCATTCATTCTGTCTAGAACTTCGAAAACGCCTCCTCCGTCACTT
CTCATGTAGAAGTTAACGGCGAGAAAGTTTGGCATTCTATTCCCAGCTGACTTGAGACAAGTCCCAACCATCTCAGCAAGCGGAGC
TGAGTGCTCCTTGCAAGCATCTTTCTCTACCGGAAACGTAGGGAAGTAATTCATCAAGAAAAGAGATGAACCTTTTGAATTCAAAG
GTTGTGATTCTTTTCTGTTCGGACAAGAACCTCGCTTCACCCCTGGATCTCCAGATTCATTTTCGACGATGTATCTCCACTGATAA
GCAACGCCTTCTTCGTCTTCTTTAGCAGCAACAGAAGTGAGAACCAAGAGCCTGTGATTCTCTTGCACCATGTCAGTCACAGTAGG
CCAGTCTTCTCCCCTTTTAGGCATTTTGGAAACGGGAGACCAGTACTTGTCCAAACCAGCGTTAGCAAACAGAGTTGATAACCCTT
TGGGTCTGTGCACATAGTCCTCAATAACGATGGTAACAATCTCTGTTGGGTTCTGAGTCAAGAACGCCTCAACTTCCCTCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866716 phospholipase C [Arabidopsis lyrata subsp. lyrata] | 1261 | 4e-136 |
| NP_569045 PI-PLC X domain-containing protein [Arabidopsis thaliana] | 1217 | 5e-131 |
| AAM65394 unknown [Arabidopsis thaliana] | 1217 | 5e-131 |
| XP_002865025 F-box family protein [Arabidopsis lyrata subsp. lyrata] | 1114 | 4e-119 |
| NP_201515 F-box protein [Arabidopsis thaliana] | 1106 | 4e-118 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93XX5 PI-PLC X domain-containing protein At5g67130 | 1217 | 2e-132 |
| Q9FH99 F-box protein At5g67140 | 1106 | 1e-119 |
| Q6BIN3 Antagonist of mitotic exit network protein 1 | 133 | 1e-006 |
| Q708Y0 EIN3-binding F-box protein 2 | 132 | 1e-006 |
| O49286 F-box/LRR-repeat protein 5 | 131 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SCA3 Phospholipase C, putative | 966 | 4e-102 |
| B9H6H9 Predicted protein (Fragment) | 927 | 1e-097 |
| B9HHA4 Predicted protein (Fragment) | 906 | 4e-095 |
| B9H6H8 Predicted protein | 853 | 5e-089 |
| B9SCA2 Ubiquitin-protein ligase, putative | 820 | 3e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67130.1 phospholipase C/ phosphoric diester hydrolase | 1218 | 1e-133 |
| AT5G67140.1 F-box family protein | 1107 | 1e-120 |
| AT4G36945.1 phospholipase C/ phosphoric diester hydrolase | 583 | 6e-060 |
| AT1G49740.1 phospholipase C/ phosphoric diester hydrolase | 580 | 1e-059 |
| AT1G13680.1 phospholipase C/ phosphoric diester hydrolase | 565 | 7e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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