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Information for unigene UN22724

FASTA Sequence
Unigene ID: UN22724Length: 1341 SSR 
GGAGAATTCACATTTGGTGTCTGCTCTCTCTCTCTCTCTCTCTGACTCTCTCTCTCTACTTTCTCGCTCTTGTATTGTGTACGCTT
CTAGAGAAAGAGGAAGAGGAAGAAGAAGACTCATGTCTGGATTATACAACAACAACTCCTCTTACTTCTCTCCTGCTAGAGCTGCT
TCTCCTCAGATCAGAAGCACTCCTGAGATCGACAGTTCTCAGTACTTGTCGGAGCTTCTCGCCGAACATCAAAAGCTTACACCTTT
TATGCAAGTCTTGCCCATATGCAGCCGCCTTTTGAATCAAGAGATGTTCAGGGTATCTGGAATGATGCCTAACCAAGGAGGATTTG
GCGATTTTGATAGACTCAGACACAGAAGTCCCAGTCCTATGGCTTCTTCTAACCTTATGTCTAATGTCTCTAACTCCGGTTTAGGT
GGTTGGAACGGAGGTCTCTCTCAGGAGAGACTTAGTGGAACACCTGGAATGACAATGGATTGGCAAGGTGCACCTGGAAGTCCAAG
CTCATACACTGTGAAAAGGATATTGCGTCTGGAGATTCCTGTTGATAGCTATCCTAATTTCAATTTTGTTGGACGGCTTCTTGGTC
CAAGAGGCAACTCATTAAAACGTGTTGAAGCTACCACTGGCTGCCGTGTGTTCATCAGAGGGAAAGGTTCAATCAAGGATCCTGAA
AAGGAAGATAAGCTAAGGGGAAGACCAGGATATGAACATCTAAATGAGCAGCTTCACATCTTAATAGAAGCAGATCTTCCAGCTAG
TATCGTGGAGATACGTCTGAGACAAGCTCAAGAAATCATTGAAGAGTTACTAAAACCTGTGGATGAGTCACAAGATTTCATAAAGA
GACAGCAGCTGAGGGAGCTAGCGTTGCTAAACTCGAACAACCTGAGGGAAGAGAGTCCAGGACCAAGCGGCGGTGGAAGCGTTTCA
CCTTTCAATTCAAGCGGTAAACGCCCTAAAACAGGATGCTAAAAGGAGAGTTTTGTTGTCTCTTTCAGTCAAGGAGCGTTTTTAAA
ATGGTACATGTCTGCATACACAAAACACTCATGTGTATATTTGGTTCTCTGGCCATTTGTGGCTGCAGTGGTGGTGGTCAAGTTAA
GGCCTCCCTGGTCTCTTTCCGGTGAGCGACCCTGTGGCTTTCCTTTCTTTTTCTTTTATTTATTTTTTGTTTTATTCGTCTTTATA
AGACAGATTCTTTACAGAACATTAAAAAAAAAAAGATTCAGAAAAAGAGATATTAAGGAAAAAAATGTTGAGATATATAAATATGT
ATGTAGGAAAAAATGTGGCTGGGAAAGGGAGTGTATTGAAATTCTTATTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181395 RNA-binding KH domain-containing protein [Arabidopsis thaliana]14153e-154
XP_002323686 predicted protein [Populus trichocarpa]12092e-130
XP_002326275 predicted protein [Populus trichocarpa]12057e-130
XP_002268790 PREDICTED: hypothetical protein [Vitis vinifera]12049e-130
XP_002531808 conserved hypothetical protein [Ricinus communis]12031e-129

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZVI3 KH domain-containing protein At2g3861014241e-156
Q8GYR4 KH domain-containing protein At3g0862011533e-125
Q0WLR1 KH domain-containing protein At4g264757133e-074
Q9FKT4 KH domain-containing protein At5g561406911e-071
Q8GWR3 KH domain-containing protein At1g096606401e-065

TrEMBL top hits (Blast detail)Scoree value
B9IGX2 Predicted protein12092e-130
B9MTT7 Predicted protein12055e-130
B9T0N9 Putative uncharacterized protein12038e-130
C6TMR9 Putative uncharacterized protein11893e-128
C6TB13 Putative uncharacterized protein11723e-126

Arabidopsis top hits (Blast detail)Scoree value
AT2G38610.1 KH domain-containing protein14258e-158
AT2G38610.2 KH domain-containing protein14258e-158
AT3G08620.1 KH domain-containing protein11596e-127
AT4G26480.1 KH domain-containing protein7133e-075
AT5G56140.1 KH domain-containing protein6911e-072

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  7%
 
104  27%
 
126  40%
 
112  13%
 
212  13%

Unigene MembersMember information