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Information for unigene UN22732
| FASTA Sequence |
| Unigene ID: UN22732 | Length: 3031 |
SSR | | GGATTCTTCCTCTCTTTCTCTCTCTACAATTATCTTCTTTCCCCTTTTTTTTTTAATTTCTTCTTCTTCTTCCTCTCTCTCTCCCT
TCCTCCGAGAAACCAATCTATTCTCTATTTCTCCATCTGCAAGTTTCTCGGAGATCGGGTGTGTGATTTATTCCCCCTCTTCTTGT
GGATCTGTCTGGTTAATGGACAATGTGATGTAAATCGAATAAAACCACAACGAAGGGAAGAGTTTCGAATTCCAAATTTTCATGGG
GATTTGCTTTAGCGCTGAAGAGCAGTTCCAATTTTCTCAGCAGCAAAACTATCACAAGAACAAGTCATCAGGGAAAAATACGACAG
GAGTGAATGTAATGAATTCAGATTGTAAAGACTCATCAGTTGGTGGTAAATCGAATCCGAGTCCGAGTCCGAGTCCGAGTCCAAGT
GGGTTGTCTTTGCCTCCTAAAAACATCAAAGATCTTCAGACAACTCCTGGTTACGAGAATGTCGATATCTTCACCTACCAAGAGAT
GAAACTGGCCACGAGGCAGTTCAGGCCTGATTACATTCTCGGCGAGGGTGGTTTTGGTGTTGTCTACAAAGGTGTTATAGACGACA
GTGTCAGGCCTGGTTATGTCTCCACCAAAGTTGCCATCAAAGAACTTAATCCTGAAGGCTTTCAGGGTGATCGAGAGTGGCTGGCT
GAAGTTAACTATTTAGGACAGCTTAGTCATCCCAACTTGGTCAAACTCATTGGCTACTGCTGTGAAGATGAACACAGATTATTAGT
CTACGAGTACATGTCCTTGGGAAGCCTCGAGAAACATCTTTTCCGAAGAGTTGGATGCACTTTGACGTGGTCGAAAAGAGTGAAAA
TCGCTCTAGACGCAGCCAAGGGTCTTGCTTTTCTTTATGGTGCTGAACGCTCCGTCATATATCGGGATCTCAAGACCGCCAACATA
TTGCTTGATGAGTGTTACAATGCTAAGCTCGCAGACTTTGGACTAGCAAAAGATGGTCCCAGAGGAGATCAAACACATGTGTCGAC
CCGTGTTATGGGCACTTACGGATACGCTGCTCCTGAGTATGTAATGACAGGACACTTGACATCCAGAAGTGATGTTTATGGATACG
GGGTACTTCTCCTTGAGATGCTCCTTGGGAAGAGGGCGATGGACAAAAGCAGACCTTGCCGGGAGCATAACTTGGTAGAGTGGGCA
CGACCGCTATTGAATCACAACAAAAAGCTTTTGAGGATCATAGACCCTCGAATGGATGGGCAATACACCACCAAGGCGTTGATGAA
AGTAGCCGATTTGGCATACCAATGCTTAAGCCAAAACCCAAAAGGAAGGCCCCTCATGAGTCATGCGGTAGAAGTCCTCGAGTCCC
TCAAGGAAGATGGTGATTCTCAGGGGGATGTCATGGCTAGTCTCCATAGCAGGGGAAAGTCTGTAACCTTATATGAAGCTGCTCCT
AGTGATTCCCAAGGGGCGAGAAACGTGGATGGGCAGAGGAGGAGAAGACCAGAAAGTGGTAGAAGCAAGAGCGAAGCCTCGGTTGA
CACTGACCTATATGTTACTGCTCTCGTTTCATCTGATCCCAACGCTACAAAGACTTGAACAGATTCACAAGTGAATTGAGAATATA
AGATTAAGAAAGTAACAGAGCTTAAGTGTATAAGTAAGTTGAGTCTTCGTTTTGGGATATTTGTTTTGTTTATGGGACTACAAATA
TTAGTGTAATATGCAATTTTATCAATCTTTGAAATTCAAATGAATTTTTTGGTCAATCTTTGAAACTCAAATGAAAGGGATCGCAT
TATATGGCGAACTACTACTATGCATAGGATAGGATGATAGGAACATCACAAACACCATGAATCTCTATTCTTTTTAGTACATAACA
TGATGAGCCACTGTACACACATGTACGTGTCTCTCTACTCTTGGTACATAACGTTATGAGACATTGTATAACCGGCTTCTCTCACC
TAAGGCTCAAAACCGGCCATGCACCAGGGGATGGCAGAGCAGGGCGGATCACTGGGACCCTTCTTACCTCTGTGAATGCTTCATTG
AGTCGAGCTGCCTGACTCATCACCCTCGACACCTTCTTCTCGTCGATTGCAACTTTGAGATGGAACCTTTGAGCTTTCTTTTTCAT
ATGATAGAGTCTGCGTCCCAAGAGAACAAAACCCATGACAGCTGCCGCCATGGAGAGAGACCAAACAGGACCAATCCTAAGTGCAT
AGTACTTGACAAGAACAAACGGCATCTTCCACCACACAGTCTCTCTACTTTTACTCTCATCACCAGACCTCACAGCCACGACATCC
CCTCCTCCACTTCCCTCAACTGCTTCCCTATCAGAAACAATCTCCTCTTCACCACTCACATTCCCAGAATCTCCATAAACTAGTTC
GTCCCCCTCTGACTCAGACAAACACTTGCTCGCATCCTCAATATGTTCTTCAACACCAGCTCGGCTCTCAACTTGGAGTTTGTCCG
TTTTCGACAAACACTCCTCGACATGTTCTTCAACACCAGCTTGGCTCTCAACTTGGAGTTTGTCCGTTTCCGACAAATCCTCGACA
TGTTCTTCAACACCAACTTGGCTCTCAACTTGAAGATCCTCCGTTTCCGACAAACACTTGCTTGCATCCTCGACATGTTCCTCAAC
ACCAGCTTGGATCTCGACTTGGAGATTGTCTGTTTCGGACATGCCCTCACCATCGATAAACCCTAATTCGTTTCCGACACCAGCAT
CATCACCCGGTTGATAAACATCAAACTGATCGAAACCCAAACCCACCGGATTCGGATACTCCGACCCGTAATCGACCCGAAGACTC
ACCGGAACCTATGCTTTGATCGGCAGAGAAATGATCAGAGACAATCATACCGTCATCGATTACACTTGATTCCATCTCCGATGTGA
TCGAATCGGTGTCGGAGCCGTGAACGAGCTCCCAATCGAGTATCTCCTCTCCTTCCATGGGTGATTGATTGATAATCGAAGAAAAG
TTTAGATTCGAGTTTCCCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885827 hypothetical protein ARALYDRAFT_480233 [Arabidopsis lyrata subsp. lyrata] | 1902 | 3e-210 |
| NP_178731 protein kinase domain-containing protein [Arabidopsis thaliana] | 1858 | 4e-205 |
| AAL87287 putative protein kinase [Arabidopsis thaliana] | 1850 | 3e-204 |
| AAC69121 putative protein kinase [Arabidopsis thaliana] | 1803 | 9e-199 |
| XP_002522939 Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis] | 1482 | 1e-161 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P46573 Protein kinase APK1B, chloroplastic | 990 | 7e-106 |
| O48814 Serine/threonine-protein kinase BIK1 | 976 | 3e-104 |
| P43293 Probable serine/threonine-protein kinase NAK | 968 | 2e-103 |
| Q06548 Protein kinase APK1A, chloroplastic | 956 | 6e-102 |
| O49840 Protein kinase 2B, chloroplastic | 937 | 9e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8H1E3 Putative uncharacterized protein At2g07180 | 1858 | 3e-205 |
| Q8RXM4 Putative uncharacterized protein At2g07180 | 1850 | 2e-204 |
| Q9ZV76 Putative uncharacterized protein At2g07180 | 1803 | 6e-199 |
| B9SAC0 Protein kinase APK1B, chloroplast, putative | 1482 | 1e-161 |
| B9HBC1 Predicted protein | 1404 | 1e-152 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G07180.1 protein kinase, putative | 1863 | 3e-208 |
| AT5G01020.1 protein kinase family protein | 1123 | 2e-122 |
| AT2G05940.1 protein kinase, putative | 999 | 5e-108 |
| AT2G28930.3 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 998 | 7e-108 |
| AT2G28930.1 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 990 | 6e-107 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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