Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22740

FASTA Sequence
Unigene ID: UN22740Length: 850 SSR 
GGCGACATCAAACCGCAAAACTTGTTGGTGAATCCACACACTCATCAAGTGAAGCTATGTGATTTTGGAAGTGCCAAAGTATTGGT
GAAAGGAGAACCAAACATCTCATACATTTGCTCGAGGTATTACAGAGCACCTGAGCTTATTTTTGGAGCAACCGAGTACACAACAG
CAATTGATGTCTGGTCTGCAGGATGTGTTCTTGCTGAGCTCTTGCTTGGACAGCCATTGTTCCCTGGTGAGAGTGGTGTTGATCAA
CTTGTAGAGATTATCAAGGTTTTGGGAACGCCTACTAGGGAAGAAATCAAGTGCATGAACCCTAACTACACTGAATTCAAGTTCCC
TCAGATCAAAGCTCATCCATGGCACAAGATATTCCACAAACGCATGCCTCCGGAGGCTGTTGATTTGGTCTCAAGACTTCTTCAAT
ACTCTCCCAATCTAAGATCTGCCGCTCTGGACATATTGGTCCACCCATTCTTTGATGAGCTAAGAGATCCAAATGCTCGTCTGCCT
AACGGACGTTTCCTTCCACCACTTTTCAACTTCAAGCCTCACGAGCTGAAAGGTGTGGCGGTGGAGATTGTAGCGAAGTTAGTACC
TGAGCATGCGAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTTTCCTCAAAAGATCCCCCCCTTAATTGTAGCACAAACACAACTC
TATAATCTGCTTCTCTCTCTCTCCCTCTCTAGTTGTATCCACAATCTGATATGTATGTTCCCTTTATTTGTTGTATTAGTAGAGAA
AAAAAAAGAAGAGAGTTATATTCAGTGTAATTTAGCCATCATCAAGAATTTTGGTACCTTTGCTTTTGTGAACCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874323 hypothetical protein ARALYDRAFT_489503 [Arabidopsis lyrata subsp. lyrata]11265e-121
NP_568486 Shaggy-related protein kinase alpha [Arabidopsis thaliana]11231e-120
ABG74911 AtSK12-like protein [Brassica napus]11212e-120
BAJ34573 unnamed protein product [Thellungiella halophila]11212e-120
XP_002882438 hypothetical protein ARALYDRAFT_477878 [Arabidopsis lyrata subsp. lyrata]11202e-120

Swiss-Prot top hits (Blast detail)Scoree value
P43288 Shaggy-related protein kinase alpha11235e-122
P43289 Shaggy-related protein kinase gamma11146e-121
P51137 Glycogen synthase kinase-3 homolog MsK-110699e-116
Q8VZD5 Shaggy-related protein kinase epsilon10456e-113
Q40518 Shaggy-related protein kinase NtK-110456e-113

TrEMBL top hits (Blast detail)Scoree value
A6XFT5 AtSK12-like protein11211e-120
Q0WUV3 AT3G05840 protein11149e-120
B0FSK1 Serine/threonine protein kinase10843e-116
B9GSY1 Predicted protein10843e-116
Q41619 Protein kinase (Fragment)10824e-116

Arabidopsis top hits (Blast detail)Scoree value
AT5G26751.1 ATSK11; protein kinase/ protein serine/threonine kinase11244e-123
AT3G05840.2 ATSK12; protein kinase/ protein serine/threonine kinase11154e-122
AT3G05840.1 ATSK12; protein kinase/ protein serine/threonine kinase11154e-122
AT5G14640.1 SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase10464e-114
AT1G57870.1 ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42); ATP binding / protein kinase/ protein serine/threonine kinase9792e-106

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  31%
 
86  46%
 
122  15%
 
101  8%

Unigene MembersMember information