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Information for unigene UN22759
| FASTA Sequence |
| Unigene ID: UN22759 | Length: 1343 |
| SNP | AACAAACTATGTTTTAAGTTTCTTTTTGAGTATAACATATAGTGGAAGTTGAGATTGTAATAATCTATACAAACGTTGACACACCA
GACAAAAGCTGAAATTGTTTTCTTACTTTTTTTATGACAGTAAATTAGTGAACACTAGACTCTTGAATCTTCTTCAGTAATTCCAG
AAAGGTTCAAGATCAACAGGTCCAGCCGAGGAAGACGGATCTTCTTGAGCATGCCTTTTACCGTATTCAAAATCCGACGAAATATC
GGTATTCATGTCAGTAGAAACTGCTGTTTCTTGTGAGACACTCATCACTTTGAGATTCTGCCTTCTGTTGTTATCAATCATAGCAT
GCAGAACCGAATGTTCTTGACCGAGAATGGGACTCTGTAAATTACCAGAGACTTGGAGGGATTGAGTTTGGTAGAGTGGGATCCTG
TGGAAAATGTCAGGACTGCTGAAACAATTAAGTGTGTTTCCTTGGGCTTGATCAGTTTGGTTGGAGAAGCAGGGCACGTAAACCGG
TTCTGTTTTGGTTTTATCGTTGAAAGGTGAAGCATCGGTTAAAGAAGGCATAAGGGAAGGGATAAAGTCGGTTCCCAGTGTACCGA
TACGGATTAGACTCGAAATAGGGATCTTCTTCCCTCCAGCACTCTTCTGGAACACCCTACATATCACCCACTCATTCTTTGCGGTT
TTAGGTAAATTATGGGCAGAGAGTTTGCCTTCAAGCCTATACTCATGCATCACCCAGTTTGTTTTCTGACCTTTGGGAGCCCTGCC
TCTATAGAAAACAAGTGTCTTCTTCATCCCCACAAGGGATTTACCACGGTAAATCTCCTTATCCTTCCCGGTTGCTTTCCAATAAC
CGGCTTCAGTTGCCCGGTTAGTCCTCAAACCGGTTGGATACTTTCTGTCCCTCACACAGAAGAAGTACCATTCTTTCTCGCCCATT
TTTGCCATCCATGGTAACTCCCATGGTTCAGATTTGTTCAAGTCAACTTCACCAATAGCTTTGGCTGAGAAGCTGATGTCAAGAAC
CTTCTTGTGGAGATAGTGACTTATGAGTTCTTCATCTGTTGGATGAAACCTGAACCCTGGAGGTAAATCCATCTGCTCTTCTTCCT
TCTGAAACCCACAAAACGTCTCCATTTTTTGTCCCTTCAAGAAACCTTAATTAAACCCTTTATTTGATCTTGAATGGTTTTTTTTA
GAGATGAATGCTATGTGAAGATATTTATTATAACTAGAGAGAGAGAAAACGATGAACAGAGAAGTTGGGGAGAAAGGTTAGGAATA
TGATGAAGAAAATATCCAGGGAAAATGGGCAAATGAAACTATAAAGGAGTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866435 ANAC100/ATNAC5 [Arabidopsis lyrata subsp. lyrata] | 1639 | 3e-180 |
| NP_200951 NAC domain containing protein 100 [Arabidopsis thaliana] | 1628 | 6e-179 |
| AAM61656 NAM, no apical meristem,-like protein [Arabidopsis thaliana] | 1556 | 1e-170 |
| XP_002871283 ANAC079/ANAC080/ATNAC4 [Arabidopsis lyrata subsp. lyrata] | 1326 | 7e-144 |
| NP_568182 NAC domain containing protein 80 [Arabidopsis thaliana] | 1309 | 6e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04017 Protein CUP-SHAPED COTYLEDON 2 | 652 | 4e-067 |
| Q9FRV4 Protein CUP-SHAPED COTYLEDON 1 | 635 | 4e-065 |
| Q9S851 Protein CUP-SHAPED COTYLEDON 3 | 582 | 5e-059 |
| Q84TE6 NAC domain-containing protein 21/22 | 503 | 8e-050 |
| Q93VY3 NAC domain-containing protein 72 | 490 | 2e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FLJ2 NAM (No apical meristem)-like protein | 1628 | 4e-179 |
| Q8LF13 NAM, no apical meristem,-like protein | 1556 | 1e-170 |
| Q9FLR3 At5g07680 | 1309 | 4e-142 |
| Q8LAN9 NAM (No apical meristem)-like protein | 1278 | 2e-138 |
| B9RLW7 NAC domain-containing protein 21/22, putative | 991 | 3e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61430.1 ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100); transcription factor | 1629 | 2e-181 |
| AT5G07680.1 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription factor | 1310 | 2e-144 |
| AT5G07680.2 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription factor | 1279 | 7e-141 |
| AT5G39610.1 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6); protein heterodimerization/ protein homodimerization/ transcription factor | 797 | 5e-085 |
| AT5G18270.1 ANAC087; transcription factor | 732 | 2e-077 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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