 |
Information for unigene UN22766
| FASTA Sequence |
| Unigene ID: UN22766 | Length: 970 |
SSR | | TTTTTTTTTGTGAGGGTAAGTAAGATCCAGAGATTGCATCAGCTTGAACATTTTTATTATAAAATCCAGTTTGTTCATTGGAGCTT
TGAGACTTGTAACTTGGATTAAGGACAGTCTTCATGAGACATGACTTCTTCAGTGCATGAGCTCTCTGATAACAATGAAAGTCACA
AGAAGCAAGAACGTCCAGATTCCCAAACCCCACCACCGGCTCCTTCAGGACCGTGTTCTGAATCTATAGATACAAGCTCCGTCTAC
TCAGAGCCGATGGCGCATGGGCTCTACCCGTATCCTGATCCTTACTACAGAAGCGTCTTTGCACACCAAGCGTATCTTCCACATCC
ATATCCTGGGGTTCAAATGCAGTTAATGGGAATGCATCAACAAGTGGTTCCATTACAGTGTGATGCAGTCGAGGAGCCTGTTTTTG
TTAACGCAAAGCAGTACCACGGTATACTCAGGCGTAGGCAATCCAGGGCAAAACTTGAGGCTCGGAACAGAGCCATGAAGTCAAAG
AAGCCGTATATGCATGAATCTCGGCATTTGCATGCGATAAACCGGCCAAGAGGATGTGGAGGACGGTTTCTCAATGCCAAGAAGAA
GAATGGAGGCCGTAAGGAGGAGGAGGAGGAGGCAACCTCTGATGAGAACACTTCAGAAGCAAGTTCCAGCCTCAGGTCTGAGAAGT
CAGCCATGGCTCCTAATGGTTGATCTTGAGTAAAAGTTCATGCACAACAACCACATGTTTAGTTTTATATTTTGGGTGGATGTTTG
TATCAGTACAATACTCTGTTTTGAACCCTCTCTGTAGACTGTGTATAGGTTATTTATTGCTTGGAACAGATAGGGTGGTGGCTTTG
TTTTAGTTATCAGAAATGCAACTGGGCACAGAATGAATAGTGTGATTGAAATGTATTGTCTGTACCAAAAACAAACCTCCTTTGCA
ATGAATTGATGTTTTGGAAAACTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34465 unnamed protein product [Thellungiella halophila] | 892 | 9e-094 |
| NP_850235 nuclear transcription factor Y subunit A-4 [Arabidopsis thaliana] | 886 | 4e-093 |
| XP_002881354 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis lyrata subsp. lyrata] | 885 | 6e-093 |
| XP_002862435 predicted protein [Arabidopsis lyrata subsp. lyrata] | 798 | 7e-083 |
| AAC16262 putative CCAAT-binding transcription factor subunit [Arabidopsis thaliana] | 683 | 1e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VY64 Nuclear transcription factor Y subunit A-4 | 886 | 2e-094 |
| Q84JP1 Nuclear transcription factor Y subunit A-7 | 596 | 8e-061 |
| Q93ZH2 Nuclear transcription factor Y subunit A-3 | 303 | 8e-027 |
| Q945M9 Nuclear transcription factor Y subunit A-9 | 292 | 1e-025 |
| Q9LNP6 Nuclear transcription factor Y subunit A-8 | 290 | 2e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ED48 Putative uncharacterized protein At1g30500.1 | 556 | 5e-055 |
| B9NB87 Predicted protein | 441 | 1e-041 |
| B9SB33 Nuclear transcription factor Y subunit A-4, putative | 421 | 2e-039 |
| B9GG16 Predicted protein | 419 | 4e-039 |
| C6SW72 Putative uncharacterized protein | 410 | 5e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G34720.1 NF-YA4 (NUCLEAR FACTOR Y, SUBUNIT A4); specific transcriptional repressor/ transcription factor | 886 | 2e-095 |
| AT1G30500.2 NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7); specific transcriptional repressor/ transcription factor | 600 | 2e-062 |
| AT1G30500.1 NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7); specific transcriptional repressor/ transcription factor | 566 | 2e-058 |
| AT1G72830.1 NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3); transcription factor | 303 | 7e-028 |
| AT3G20910.1 NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor | 292 | 1e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
