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Information for unigene UN22780
| FASTA Sequence |
| Unigene ID: UN22780 | Length: 1062 |
| SNP | ATCAACAATAGACATCAGATATCTACAAATTAAAATGAAGTTTTCTTACGGTACAAGGTTCGCTTTCTTGGCTCTCTTCCTCTTTG
CGCTACAATCTGTGTGCGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGTGGAAAGGTTCAAGAC
AATGAAGGAAAACTTCTTTCTCTTTCGCTTGACAAATCCTCTGGATCCGGTTTTCAATCCAATCAAGAGTTTCTTTATGGCAAAGC
TGAGGTTCAAATGAAGCTTGTCCCTGGTAACTCTGCTGGAACTGTCACAACTTTCTATCTTAAAGCGCCTGGAACTATGTGGGATG
AGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCTGTTACACTTCATACTAATGTTTACACAAAAGGCACAGGAGACAAA
GAACAACAGTTTCATTTATGGTTCGACCCAACTGCTGGCTTTCACACTTACTGCATCACATGGAATCCCCAAAGGATTATCTTTAC
CGTAGATGGCATTCCCATTAGAGAATTCAGGAACTCTGAGCCAATTGGAATTCCATTCCCAAAGGACCAACCAATGAGAGTCTACG
CGAGCCTTTGGGAGGCCGAGCATTGGGCTACAAGAGGAGGATTAGAGAAAACAGATTGGTCCAAGGCTCCTTTTACTGCTTTCTAC
AGAAACTACAATGTGGAAGGATGTGTTTGGGCTAATGGAAAATCATCTTGCCCGGCGAATTCCCCATGGTTCACTCAGAAATTGGA
CCAGAGCGGCATAGATAAAGTGAAATGGGCGCAGAGTAAGTACATGGTCTATAACTATTGCACCGATACAAAGAGGTTTCCTAAAG
GTGTTCCTAAAGTGTGCACTTAACAATTGATTCTTTGATTCGTCAATAAGTTACTGGCATTGTCTTTATAATTCAAATAAGTTTTA
TTTATTCTGTTTCATTCATTTGTTTCTCATGTATGTGTGTGTGGTGGTGTATGTGCAAGATTTTTAAATTAATAAGTGAATATAAT
AAATTATGAAAACAATGGTTTTCGTTACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176710 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1358 | 9e-148 |
| XP_002867357 ATXTH18/XTH18 [Arabidopsis lyrata subsp. lyrata] | 1352 | 5e-147 |
| NP_194757 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1351 | 6e-147 |
| XP_002888396 ATXTH17 [Arabidopsis lyrata subsp. lyrata] | 1345 | 3e-146 |
| XP_002867356 ATXTH19 [Arabidopsis lyrata subsp. lyrata] | 1334 | 6e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80803 Probable xyloglucan endotransglucosylase/hydrolase protein 17 | 1358 | 4e-149 |
| Q9M0D2 Probable xyloglucan endotransglucosylase/hydrolase protein 18 | 1351 | 3e-148 |
| Q9M0D1 Probable xyloglucan endotransglucosylase/hydrolase protein 19 | 1320 | 1e-144 |
| Q9FI31 Xyloglucan endotransglucosylase/hydrolase protein 20 | 1303 | 9e-143 |
| Q38857 Xyloglucan endotransglucosylase/hydrolase protein 22 | 1014 | 3e-109 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2RVL7 At1g65310 | 1358 | 6e-148 |
| Q84JX3 Putative xyloglucan endotransglycosylase | 987 | 7e-105 |
| C0IRI1 Xyloglucan endotransglucosylase/hydrolase 8 | 974 | 2e-103 |
| C6THE7 Putative uncharacterized protein | 964 | 3e-102 |
| Q84JB9 Putative xyloglucan endotransglycosylase | 964 | 3e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65310.1 XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1359 | 3e-150 |
| AT4G30280.1 XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1352 | 2e-149 |
| AT4G30290.1 XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1321 | 7e-146 |
| AT5G48070.1 XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1304 | 6e-144 |
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1014 | 3e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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