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Information for unigene UN22795

FASTA Sequence
Unigene ID: UN22795Length: 1378 SSR 
GCAAAAAACACTAGTTTAGTTCACACAATATTTTTGTTTTGTACACAAAAGTCTGAGCCAGAAAAGTTGACAACAAATCAATGGTG
TGATTGTGAGCTCATACACACATCAAACCCAAGGTTCATAGATTAAAACATAATGAAATATCAGTGACCCGCTGATGGATTCGTAA
GCAACTCGAGTGACTTCTTCAGATGTTCTACAGCGGTAGAGACTTCATCAAAAGCCAAAGCTCCAACAGCGAACCTAGCAGCCTTG
TGTGCCTCTGCTATCTTCTCTGGCCCTGGCTGGTAGCTGCTGTCGTAATGGTACTTCTGAGCTGGAGGATCTATAACAGGAGCAAC
ATTGACACGCCCGTTTGATGATGAATAAGGAGGAGGAGAGGGAGCAGAGGCGAAGCTTGAGGAAGAAGGAGCAGGTGCGGAATGCG
GAGAGGAATAGTAAGGTTCAGGGTTCTGGAAGTGAGAAGGGTAGTGGGAAGGAGTGGCTGGGAGGGTGCTCTCACTGAAGCTAGGG
TAAGACTGGAAATTAGGGAGAGAGCTTGGCGAAGGCTCATGAGATGGGTAGTTTTGTGGTGGTGGCGGCATGTGTTGTGGTGGATC
TTGGTGGTATGATTGATGGTTGTAAGTATGAGGGTAAGGGGAGTCTGAGGGTCCCGTGGGAGGCGCATTGAAATCGTTGGAAGGGT
AAGAAGATGGTGGTGGAGGCGGGACATCTGTTGGATAATTGTTGTTAGGATTGTCATGAAACCTTGGAGGAGGTAGATGATGTTGT
GGCACTTCAGGGAAATGGTGGTGGCTTGAGTCATCATTCGAGTCGTGGGATGGATAAATCAGTTTCATCATCAACAGGATCACCTG
GAGTGGGCTTCCTTCCTTCTTTAATCGCTTTCCTTATGTCAGCAGCTTTCCAAGCGGCATGCTTCTGTTTCTGCTCTATATCAGGA
GGAACGGGGCCAAACTGGCTCAGAATCTCAAAGAAGATGTTTGCAGCATAAAATGTTTTGGCAGTGCCTAAGTCTGCTCGTCCTGC
ACGATCCTGCTTGTCTGCCTTTGCAAAGACATTTAGTGCAAACCCCTCCACGTGCATACTGTCATCTGGGGACAGAGTCAATGATT
TCTTATCCTTTTCGAGCTGATTAATTAGGGACATAAGGATGGAATTTGTGGTATTAGTTCTCTCGCTCTGTGGAATCTTCAATCCT
CGTTCCATGGCGTACAGCCGACAGTAATAAGCAACAAGCGGTTCATGTTTCTGCAACTCGTCCGCTCGTTGCAAGTAAGGCAGAAG
AGTCTTCGCTGGTTCGTTCGCGTTCGACATCGATTCTCTCTCTCTCTCTCTCTCTATCTGAGCTTCGTAGCTTTCTCACAGATTGT
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867543 hydroxyproline-rich glycoprotein family protein [Arabidopsis lyrata subsp. lyrata]10821e-115
NP_194405 vacuolar protein sorting-associated protein VTA1 [Arabidopsis thaliana]10472e-111
XP_002277187 PREDICTED: hypothetical protein [Vitis vinifera]7065e-072
CBI26701 unnamed protein product [Vitis vinifera]7065e-072
XP_002317288 predicted protein [Populus trichocarpa]6932e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q55B11 Vacuolar protein sorting-associated protein VTA1 homolog2985e-026
Q32L63 Vacuolar protein sorting-associated protein VTA1 homolog2672e-022
Q9NP79 Vacuolar protein sorting-associated protein VTA1 homolog2653e-022
Q5R5W5 Vacuolar protein sorting-associated protein VTA1 homolog2644e-022
Q9CR26 Vacuolar protein sorting-associated protein VTA1 homolog2627e-022

TrEMBL top hits (Blast detail)Scoree value
Q9SZ15 AT4g26750/F10M23_9010471e-111
B9HZN8 Predicted protein6931e-070
B6TC61 Putative uncharacterized protein6795e-069
C0PM77 Putative uncharacterized protein6795e-069
C5Z1L0 Putative uncharacterized protein Sb10g0118106795e-069

Arabidopsis top hits (Blast detail)Scoree value
AT4G26750.1 hydroxyproline-rich glycoprotein family protein10476e-114
AT4G13340.1 leucine-rich repeat family protein / extensin family protein1982e-015
AT3G19020.1 leucine-rich repeat family protein / extensin family protein1703e-012
AT2G15880.1 leucine-rich repeat family protein / extensin family protein1622e-011
AT4G33970.1 protein binding / structural constituent of cell wall1613e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  40%
 
91  20%
 
72  40%

Unigene MembersMember information