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Information for unigene UN22829

FASTA Sequence
Unigene ID: UN22829Length: 693  SNP
GGGAGAGTATTGAAAAATATCAAGTTGCAACTTTCAGCAATCTCTCTTTTTTTGTTTTCCCCCAAATTGGACCTCTTCGTCGCACT
ATCTTAGGGTTTCGTATTTCGCTCTTCCTCGAGGAATCGATCTTGCGCAGTTACAGCAATGGGGAAAAGGAAGTCAAGGGCAAAGC
CTGCTACAACGAAGCGTATGGACAAGCTTGACACTGTCTTTAGTTGTCCTTTCTGCAATCACGGCTCTAGTGTCGAATGCCAAATT
AATATGAAGGAGATGATTGGTATTGCAACTTGTAGAATCTGTGAAGAAAGCTTTAGCACAACTATTACAGCTTTGAGTGAAGCTAT
AGACATCTATAGTGAATGGATTGACGAGTGCGAGAGGGTTAACACTGTGGAAGATGATGTTGAGCAAGAAGAGGAAGCTGAAGAAG
AAGAAGTTTATGAAGAAGAGGAAGAAGAAGATGAAGAGGAAGATGACCGTGTGTCTGTCAAAAGGAAGTTTAACTACCGAGACGAT
TAATCTTTTATCCAAAAAACCAGGCAAGTCCTGTTAGACATTTGCCTTTTGTATTCTAGTATCTATCTATCTGTTGGAAATTGCAA
GAACAGTCTTTAGTGTTTTCTCAGTGTCTGGTAAAAGAACAACAGTTTGTGATGGTTGCCAAATGAATTAAAAAGCCTTTACCAAA
AAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865208 hypothetical protein ARALYDRAFT_356397 [Arabidopsis lyrata subsp. lyrata]5313e-052
NP_568654 transcription elongation factor 1-like protein [Arabidopsis thaliana]5198e-051
CBI30630 unnamed protein product [Vitis vinifera]3952e-036
XP_002277951 PREDICTED: similar to Os07g0631100 [Vitis vinifera]3891e-035
XP_002285261 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]3862e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q8LEF3 Transcription elongation factor 1 homolog5222e-052
Q8LHP0 Transcription elongation factor 1 homolog3814e-036
P36053 Transcription elongation factor 12443e-020
O13868 Transcription elongation factor 1 homolog2425e-020
Q9XVZ8 Transcription elongation factor 1 homolog2264e-018

TrEMBL top hits (Blast detail)Scoree value
B9S937 Transcription elongation factor, putative3824e-035
A2X2X2 Putative uncharacterized protein3816e-035
Q0D4E9 Os07g0631100 protein3816e-035
B6SHB6 Putative uncharacterized protein3791e-034
C5Z4C0 Putative uncharacterized protein Sb10g0037103791e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G46030.1 unknown protein5222e-053
AT5G03710.1 unknown protein1143e-006
AT4G02810.1 unknown protein1118e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
912  67%
 
62  11%
 
104  22%

Unigene MembersMember information