RadishBase

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Information for unigene UN22850

FASTA Sequence

Unigene ID: UN22850	Length: 810	SSR
GGAACTCACTCCTCTCCTACAAAACCTAAACGTTTTCTTTTCTCAAAGCAAGCAAAAAAGTCATGGCAGAAGCGTCTACTTTGGTG GGGAAGCTTGAGACAGATGTGGAGATCAAAGCTTCTGCTGGAAAGTTCCATCACATGTTCGCAGGAAGACCACACCATGTGTCAAA AGCAACTCCAGGGAACATTCAGAATTGTGAGCTACATGAAGGCGACTGGGGCAAAGTCGGTTCAGTTGTCATCTGGAAATACGTTC ATGATGGAGAGGCAAAGGTGGCTAAGGAGAGGGTCGAGGCGGTGGAGCCAGAGAAGAACCTGATCACGTTCAGGGTTATAGAAGGA GATCTGTTGAAAGAGTACAAAAGCTTTGTGATCACCATCCAGGTGACCCCTAAGCATGGAGGGCCCGGTAGTGTTGTGCATTGGCA CCTTGAGTACGAAAAAATTAGCGATGAGGTTTCTCACCCTGAAACTCTCCTCCAGTTCTGTGTTGAAATCTCAAAAGAGATCGATG AACATCTCTTGAACGAAGAATAAAGGACCACTCCTCGTGTGTGTGTGTGTGTGTGTGTCAGTGTGGCCTCTTTCAGTATCTGATGA AACCAAAATATATAATGTGCTGGTGTCCTAGTTTGGGTAAGAGATATATGTTGGCGTGTGTCACGCGTGTATGCATAATACTATTA TGGTCGAGATATGTTTAAAGTTCTTAATTTGAATCGGTGTGTAATAGGAGTCAAGCTACAAGGCTACTTGAAGTTTATTTACAAAA AAAGTTTTATGCTAGCATATATTTACGTCGGCTAAT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002888799 predicted protein [Arabidopsis lyrata subsp. lyrata]	764	4e-079
NP_850976 MLP-like protein 34 [Arabidopsis thaliana]	761	1e-078
CAC83580 major latex-like protein [Arabidopsis thaliana]	761	1e-078
NP_565003 MLP-like protein 34 [Arabidopsis thaliana]	761	1e-078
AAD55499 Unknown protein [Arabidopsis thaliana]	761	1e-078

Swiss-Prot top hits (Blast detail)	Score	e value
Q941R6 MLP-like protein 31	761	4e-080
Q9SSK7 MLP-like protein 34	761	4e-080
Q9SSK9 MLP-like protein 28	748	1e-078
Q9SSK5 MLP-like protein 43	688	1e-071
Q9C7I7 MLP-like protein 165	430	1e-041

TrEMBL top hits (Blast detail)	Score	e value
Q0WLG8 Putative uncharacterized protein At1g70850	761	7e-079
Q3ECE5 Putative uncharacterized protein At1g70850.2	761	7e-079
A8MRH3 Uncharacterized protein At1g70830.3	753	6e-078
B3H4F3 Uncharacterized protein At1g70830.5	748	2e-077
Q3E7W3 Putative uncharacterized protein At1g70830.2	748	2e-077

Arabidopsis top hits (Blast detail)	Score	e value
AT1G70840.1 MLP31 (MLP-LIKE PROTEIN 31)	762	3e-081
AT1G70850.1 MLP34 (MLP-LIKE PROTEIN 34)	761	4e-081
AT1G70850.2 MLP34 (MLP-LIKE PROTEIN 34)	761	4e-081
AT1G70850.3 MLP34 (MLP-LIKE PROTEIN 34)	761	4e-081
AT1G70830.3 MLP28 (MLP-LIKE PROTEIN 28)	753	3e-080

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	7			39%


6	7			39%


8	4			22%

Unigene Members	Member information