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Information for unigene UN22864
| FASTA Sequence |
| Unigene ID: UN22864 | Length: 766 |
| SNP | AAAACAGTGATCTATTTTGTAGCTCTTCCTCTCGTATCTTCGCCCAGACAAGAAGCTACCTTTATCCGAGGAGTTTTTAGGGTTTC
CATTTCTTTCCCTTTTCGTACAACCAAATCTTCGAAACCCTAATATTAAGACCAGGCTTCAGCAAATCCTTGTCTGTTTGTTCCCT
CAGGTTCATGTCTGATCTTGAAGTTCAAGTCCCCACTGCCTTTGATCCGTTTGCTGATGCAAATGCTGAGGACGCTGGAGCTGGAA
CAAAGGAATACGTGCACATACGTGTTCAGCAGCGTAATGGTAGAAAAAGCCTGACCACTGTCCAGGGCCTTAAGAAAGAGTACAGC
TATACCAAGATCCTTAAAGACCTCAAGAAAGAATTCTGCTGCAATGGCACTGTCGTCCAGGACTCTGAACTAGGACAGGTTATTCA
GCTACAAGGTGATCAGAGGAAGAACGTCTCTACCTTCCTTGTTCAGGCTGGTCTGGTAAAGAAGGATAACATCAAGATCCATGGTT
TTTGAGCAAATTCTACATACTTGGTTGTTAGTTCATCCTTGTGCAACCAACTTGAATTTGCGTAATTAATCAATCAGCCCTTCTCA
AAGGCAGTATAAACAATCACTTATGTATGATTAATAATGTTTTATATATATTGTCAGAAAACAAAAATTAATGGTTTGTTTATGAG
CGAATGTAACACAAATGTATGAACTTTTGATTTGCGATTGTACCGTGAGATTATCAATAAAACTTTTGTGAATTGAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175831 protein translation factor SUI1-2 [Arabidopsis thaliana] | 572 | 7e-057 |
| NP_194443 protein translation factor SUI1-1 [Arabidopsis thaliana] | 563 | 8e-056 |
| NP_200287 Translation initiation factor SUI1 family protein [Arabidopsis thaliana] | 559 | 2e-055 |
| XP_002867520 hypothetical protein ARALYDRAFT_492082 [Arabidopsis lyrata subsp. lyrata] | 559 | 2e-055 |
| Q9SQF4 RecName: Full=Protein translation factor SUI1 homolog; AltName: Full=Translation initiation factor nps45 | 554 | 9e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JV4 Protein translation factor SUI1 homolog 2 | 572 | 3e-058 |
| P41568 Protein translation factor SUI1 homolog 1 | 563 | 4e-057 |
| Q9SQF4 Protein translation factor SUI1 homolog | 554 | 4e-056 |
| O48650 Protein translation factor SUI1 homolog | 520 | 4e-052 |
| P56330 Protein translation factor SUI1 homolog | 509 | 7e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFV1 At5g54760 | 559 | 2e-055 |
| A9XNY8 Putative translation factor (Fragment) | 542 | 1e-053 |
| A9XNZ0 Putative translation factor (Fragment) | 542 | 1e-053 |
| A9XNZ1 Putative translation factor (Fragment) | 542 | 1e-053 |
| A9PDG1 Predicted protein | 539 | 3e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G54290.1 eukaryotic translation initiation factor SUI1, putative | 573 | 2e-059 |
| AT4G27130.1 eukaryotic translation initiation factor SUI1, putative | 564 | 3e-058 |
| AT5G54760.1 eukaryotic translation initiation factor SUI1, putative | 560 | 8e-058 |
| AT5G54760.2 eukaryotic translation initiation factor SUI1, putative | 560 | 8e-058 |
| AT5G54940.1 eukaryotic translation initiation factor SUI1, putative | 441 | 5e-044 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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