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Information for unigene UN22871
| FASTA Sequence |
| Unigene ID: UN22871 | Length: 1582 |
SSR | SNP | CGAAAACACATGGCTTTAGTTAATAGTTATACGCAAGAGCAAAGTAGCTCATGAGGTTTGGAACGAACCAAAAACTACATAATTCC
TAAGGGGACCAAATCGCCCCATCAAGACATATAACACTCCCTCTCTTAACTTACGATCATGTTGGTGAGTTATACTTTCTTCCAGA
ACACAACAAAGAGGAAAACCATTTTTATTATTGACAGAAACAAATGAAAAGGCATTAAAATACCAAATCTCGTTTCCGAGATTTCA
TTGTGACACTTGCATGAGAAGTTAGTCCAGGAAAAAAAGACCTTTGAGCATCAATTGTAGAAGTCTGTTGGTATCTTTTCACTAAC
AGTGGAACCGAAGTTAGGACCACCCTTGCGATATTGGATAAGAAACTCGACCGGATATCCCTTCAGTTTATGAGGGACAAGGTCCA
AATCCTGAAACGTCAAGGCCTTGTCAGATACAAGTGTATCGGTTGTAAGCGCATTGATTTGATCCAAATTGAATATCTGGGGAGAG
GGTAGAGGGAACGGTACTTTGTTCACCATGAAATCCCGAGGACCCGCCATTGCCTTAGCAATTGGAAATGGAAGCTTCACATATCG
AGGCCATTCACGAATCATATCAAACATGATCTCTGCCAAATCATGAGGGGTAAAGACATCTGGACCACCCAGTTCATAGGTTTTCC
CCATGCTGGAGCCATCATCCTTTAGAGCTGCAACGATTGCAGCAGCAACGTCAACCACGTATACGGGCTGGGATTTGTTGGTTCCG
CCACCTATGAGCGGGAGGAAACCATATTTCTTAACGAACATCGCCCAGGGGTTCAAGATTCTGTCCTCTGTACCAATCATGGTCGC
AGGTCTCATGACTGTCGCCTCCGGTAGAGCGTTCAAGACAGCTTCCTCAGCAGCAGCTTTTGCCCTCTGCATTCTTGAAGGAGATG
ACACAGAAGCTCCCAGACAAGAAACCTGAATAAATCTCATTATCCCACCATGTTCCTTAGCCACCAATGCAAGTTTCTCGGCCATG
TGATGATTCACCTCTTCGAAACTGAAATTTCTGGTCTCGTACTCTCTTCCAATAAGATTGATAACGACATTAGCCTTTGCCATGAC
AGCCTTAATCGAGTCTTCATCTCTTGGATCGAATTTCATCGGTACTACCTGTCCTAAATCTCCCATCAACTTGAGATGTCGAGGAT
TATCCTCTGAGCCTCGGAAAGGAACTAGCACTTGTGATCCCATTTTAGCAAGCTGCTGCACAAGATAACGACCAAGAAACCCAGTG
GCTCCAAACACCGTAGCTACAATGCCACTGACGGAAGATCTGCCACCAGTACCCTTGCGAGCGAGGTGTCCCACGCCCTTTGTAGC
AAGGGAAGACGAGTATCGACGATTATCAGCTCCATCCAGGTGGTGATCGGACACTCCGTAGAGCGATCTGAGAGAAGACGATGAAT
AGATCGAAGCTCCTCCGCCGAGGGGCCGTTGGACTAATCTCCTGGAAACTGCCTGCATCCTCCGAGAGAGACAGAACAACAACAAA
CACAGATGAACGAGAGAGAGAGAGAGAGAGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884196 catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] | 1933 | 3e-214 |
| NP_565469 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Arabidopsis thaliana] | 1929 | 1e-213 |
| BAH20309 AT2G20360 [Arabidopsis thaliana] | 1650 | 2e-181 |
| ACU23211 unknown [Glycine max] | 1581 | 2e-173 |
| XP_002301843 predicted protein [Populus trichocarpa] | 1579 | 4e-173 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0MQB3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 548 | 6e-055 |
| Q16795 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 548 | 6e-055 |
| P34943 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 547 | 7e-055 |
| P0CB81 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 547 | 7e-055 |
| P0CB82 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 547 | 7e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SK66 Putative NADH-ubiquinone oxireductase | 1929 | 7e-214 |
| B9DHU2 AT2G20360 protein (Fragment) | 1650 | 2e-181 |
| C6TJX1 Putative uncharacterized protein | 1581 | 2e-173 |
| B9GRC3 Predicted protein | 1579 | 3e-173 |
| B9IBC6 Predicted protein | 1573 | 1e-172 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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